| Full name: RBM12B antisense RNA 1 | Alias Symbol: PRO1905 | ||
| Type: non-coding RNA | Cytoband: 8q22.1 | ||
| Entrez ID: 55472 | HGNC ID: HGNC:28818 | Ensembl Gene: ENSG00000279331 | OMIM ID: |
Expression of RBM12B-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RBM12B-AS1 | 55472 | 220222_at | 0.0115 | 0.9766 | |
| GSE20347 | RBM12B-AS1 | 55472 | 220222_at | 0.0855 | 0.3493 | |
| GSE23400 | RBM12B-AS1 | 55472 | 220222_at | -0.0266 | 0.5094 | |
| GSE26886 | RBM12B-AS1 | 55472 | 220222_at | 0.0092 | 0.9598 | |
| GSE29001 | RBM12B-AS1 | 55472 | 220222_at | -0.0676 | 0.6509 | |
| GSE38129 | RBM12B-AS1 | 55472 | 220222_at | -0.0395 | 0.6760 | |
| GSE45670 | RBM12B-AS1 | 55472 | 220222_at | 0.0581 | 0.4224 | |
| GSE53622 | RBM12B-AS1 | 55472 | 76715 | 0.5313 | 0.0000 | |
| GSE53624 | RBM12B-AS1 | 55472 | 76715 | 0.5791 | 0.0000 | |
| GSE63941 | RBM12B-AS1 | 55472 | 220222_at | 0.0753 | 0.6485 | |
| GSE77861 | RBM12B-AS1 | 55472 | 220222_at | 0.0404 | 0.7908 | |
| SRP133303 | RBM12B-AS1 | 55472 | RNAseq | 0.5864 | 0.0060 | |
| SRP159526 | RBM12B-AS1 | 55472 | RNAseq | 1.6354 | 0.0009 | |
| SRP193095 | RBM12B-AS1 | 55472 | RNAseq | 0.8227 | 0.0000 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by RBM12B-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of RBM12B-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RBM12B-AS1 | 55472 | 16 | 1 | 13 | |
| GSE20123 | RBM12B-AS1 | 55472 | 17 | 1 | 12 | |
| GSE43470 | RBM12B-AS1 | 55472 | 21 | 1 | 21 | |
| GSE46452 | RBM12B-AS1 | 55472 | 22 | 0 | 37 | |
| GSE47630 | RBM12B-AS1 | 55472 | 24 | 0 | 16 | |
| GSE54993 | RBM12B-AS1 | 55472 | 0 | 20 | 50 | |
| GSE54994 | RBM12B-AS1 | 55472 | 34 | 1 | 18 | |
| GSE60625 | RBM12B-AS1 | 55472 | 0 | 4 | 7 | |
| GSE74703 | RBM12B-AS1 | 55472 | 18 | 1 | 17 | |
| GSE74704 | RBM12B-AS1 | 55472 | 12 | 0 | 8 |
Total number of gains: 164; Total number of losses: 29; Total Number of normals: 199.
Somatic mutations of RBM12B-AS1:
Generating mutation plots.
Highly correlated genes for RBM12B-AS1:
Showing top 20/442 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RBM12B-AS1 | ERC2-IT1 | 0.689265 | 4 | 0 | 4 |
| RBM12B-AS1 | LINC00514 | 0.672212 | 3 | 0 | 3 |
| RBM12B-AS1 | LUZP4 | 0.65919 | 3 | 0 | 3 |
| RBM12B-AS1 | GPR12 | 0.655531 | 4 | 0 | 4 |
| RBM12B-AS1 | DDX11-AS1 | 0.653022 | 4 | 0 | 3 |
| RBM12B-AS1 | CLRN1-AS1 | 0.646345 | 3 | 0 | 3 |
| RBM12B-AS1 | KIR2DL3 | 0.645087 | 4 | 0 | 4 |
| RBM12B-AS1 | ARHGEF15 | 0.638849 | 6 | 0 | 5 |
| RBM12B-AS1 | LGALS8-AS1 | 0.637814 | 3 | 0 | 3 |
| RBM12B-AS1 | NPFF | 0.63689 | 3 | 0 | 3 |
| RBM12B-AS1 | NCR2 | 0.635819 | 4 | 0 | 3 |
| RBM12B-AS1 | RPGRIP1 | 0.633443 | 5 | 0 | 4 |
| RBM12B-AS1 | SIGLEC5 | 0.631085 | 5 | 0 | 4 |
| RBM12B-AS1 | NEUROD1 | 0.630889 | 3 | 0 | 3 |
| RBM12B-AS1 | KCNK9 | 0.627587 | 4 | 0 | 4 |
| RBM12B-AS1 | SCN8A | 0.62522 | 3 | 0 | 3 |
| RBM12B-AS1 | C10orf91 | 0.62335 | 3 | 0 | 3 |
| RBM12B-AS1 | PRR34 | 0.622882 | 7 | 0 | 5 |
| RBM12B-AS1 | RGS6 | 0.621924 | 3 | 0 | 3 |
| RBM12B-AS1 | PPEF1 | 0.619606 | 3 | 0 | 3 |
For details and further investigation, click here
