| Full name: SLC26A4 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 7q22.3 | ||
| Entrez ID: 286002 | HGNC ID: HGNC:22385 | Ensembl Gene: ENSG00000233705 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SLC26A4-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SLC26A4-AS1 | 286002 | 1557107_at | 0.0519 | 0.8337 | |
| GSE26886 | SLC26A4-AS1 | 286002 | 1557107_at | -0.0736 | 0.4416 | |
| GSE45670 | SLC26A4-AS1 | 286002 | 1557107_at | 0.1042 | 0.2925 | |
| GSE53622 | SLC26A4-AS1 | 286002 | 13697 | 0.2894 | 0.0002 | |
| GSE53624 | SLC26A4-AS1 | 286002 | 13697 | 0.4688 | 0.0000 | |
| GSE63941 | SLC26A4-AS1 | 286002 | 1557107_at | 0.0135 | 0.9252 | |
| GSE77861 | SLC26A4-AS1 | 286002 | 1557107_at | 0.0000 | 0.9995 | |
| SRP133303 | SLC26A4-AS1 | 286002 | RNAseq | 0.3932 | 0.2045 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SLC26A4-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of SLC26A4-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SLC26A4-AS1 | 286002 | 12 | 0 | 18 | |
| GSE20123 | SLC26A4-AS1 | 286002 | 12 | 0 | 18 | |
| GSE43470 | SLC26A4-AS1 | 286002 | 6 | 2 | 35 | |
| GSE46452 | SLC26A4-AS1 | 286002 | 10 | 1 | 48 | |
| GSE47630 | SLC26A4-AS1 | 286002 | 8 | 3 | 29 | |
| GSE54993 | SLC26A4-AS1 | 286002 | 2 | 9 | 59 | |
| GSE54994 | SLC26A4-AS1 | 286002 | 16 | 3 | 34 | |
| GSE60625 | SLC26A4-AS1 | 286002 | 0 | 0 | 11 | |
| GSE74703 | SLC26A4-AS1 | 286002 | 6 | 2 | 28 | |
| GSE74704 | SLC26A4-AS1 | 286002 | 8 | 0 | 12 |
Total number of gains: 80; Total number of losses: 20; Total Number of normals: 292.
Somatic mutations of SLC26A4-AS1:
Generating mutation plots.
Highly correlated genes for SLC26A4-AS1:
Showing all 17 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SLC26A4-AS1 | PSG9 | 0.663154 | 3 | 0 | 3 |
| SLC26A4-AS1 | FAM170B-AS1 | 0.650451 | 3 | 0 | 3 |
| SLC26A4-AS1 | TEX22 | 0.623522 | 3 | 0 | 3 |
| SLC26A4-AS1 | CABP4 | 0.612589 | 4 | 0 | 3 |
| SLC26A4-AS1 | SHISA8 | 0.605866 | 4 | 0 | 3 |
| SLC26A4-AS1 | KRTAP3-1 | 0.592132 | 3 | 0 | 3 |
| SLC26A4-AS1 | SYCN | 0.585638 | 4 | 0 | 3 |
| SLC26A4-AS1 | TBR1 | 0.549013 | 3 | 0 | 3 |
| SLC26A4-AS1 | PCDH10 | 0.54772 | 4 | 0 | 3 |
| SLC26A4-AS1 | SYNGR3 | 0.54718 | 4 | 0 | 3 |
| SLC26A4-AS1 | FSCN3 | 0.54258 | 5 | 0 | 3 |
| SLC26A4-AS1 | TCIRG1 | 0.542272 | 3 | 0 | 3 |
| SLC26A4-AS1 | GGN | 0.538442 | 3 | 0 | 3 |
| SLC26A4-AS1 | DPF1 | 0.533162 | 4 | 0 | 3 |
| SLC26A4-AS1 | AANAT | 0.507907 | 4 | 0 | 3 |
| SLC26A4-AS1 | GRIK1-AS1 | 0.505094 | 3 | 0 | 3 |
| SLC26A4-AS1 | LCNL1 | 0.501877 | 4 | 0 | 3 |
For details and further investigation, click here
