SLC5A5

 

Full name: solute carrier family 5 member 5 Alias Symbol: NIS
Type: protein-coding gene Cytoband: 19p13.11
Entrez ID: 6528 HGNC ID: HGNC:11040 Ensembl Gene: ENSG00000105641 OMIM ID: 601843
Drug and gene relationship at DGIdb

 

Expression of SLC5A5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC5A5 6528 211123_at 0.0196 0.9615
GSE20347 SLC5A5 6528 211123_at -0.0562 0.5353
GSE23400 SLC5A5 6528 211123_at -0.1268 0.0012
GSE26886 SLC5A5 6528 211123_at 0.0631 0.7391
GSE29001 SLC5A5 6528 211123_at -0.1836 0.3802
GSE38129 SLC5A5 6528 211123_at -0.1217 0.1154
GSE45670 SLC5A5 6528 211123_at 0.0548 0.5899
GSE53622 SLC5A5 6528 56098 0.0679 0.7292
GSE53624 SLC5A5 6528 56098 0.0791 0.5598
GSE63941 SLC5A5 6528 211123_at 0.1398 0.3876
GSE77861 SLC5A5 6528 211123_at -0.0336 0.7730
GSE97050 SLC5A5 6528 A_23_P101774 0.3258 0.1994
SRP133303 SLC5A5 6528 RNAseq 0.1010 0.6630
TCGA SLC5A5 6528 RNAseq -3.4848 0.0000

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by SLC5A5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC5A5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC5A5 6528 4 4 22
GSE20123 SLC5A5 6528 3 2 25
GSE43470 SLC5A5 6528 2 6 35
GSE46452 SLC5A5 6528 47 1 11
GSE47630 SLC5A5 6528 4 8 28
GSE54993 SLC5A5 6528 15 4 51
GSE54994 SLC5A5 6528 6 14 33
GSE60625 SLC5A5 6528 9 0 2
GSE74703 SLC5A5 6528 2 4 30
GSE74704 SLC5A5 6528 0 2 18
TCGA SLC5A5 6528 17 9 70

Total number of gains: 109; Total number of losses: 54; Total Number of normals: 325.  


 

Somatic mutations of SLC5A5:

 

Generating mutation plots.

 

Highly correlated genes for SLC5A5:

 

Showing top 20/1248 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC5A5POU1F10.802313303
SLC5A5C10orf910.797787303
SLC5A5SCLY0.780541303
SLC5A5TMEM229A0.776282303
SLC5A5C1QTNF10.754374303
SLC5A5REG3A0.749757505
SLC5A5FUT70.747887303
SLC5A5LRRC710.747386303
SLC5A5MAGEA80.744315303
SLC5A5CLCNKA0.742921303
SLC5A5IL1RAPL20.741467404
SLC5A5PNPLA70.732057303
SLC5A5RAI10.731056505
SLC5A5RNF170.724853505
SLC5A5GPHB50.719816403
SLC5A5IL9R0.719325706
SLC5A5OR7C20.718573404
SLC5A5NOS30.717945404
SLC5A5SHANK10.717527404
SLC5A5PHF70.716388605

For details and further investigation, click here