| Full name: PHD finger protein 7 | Alias Symbol: NYD-SP6|HSPC226 | ||
| Type: protein-coding gene | Cytoband: 3p21.1 | ||
| Entrez ID: 51533 | HGNC ID: HGNC:18458 | Ensembl Gene: ENSG00000010318 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of PHF7:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PHF7 | 51533 | 221611_s_at | -0.2674 | 0.3905 | |
| GSE20347 | PHF7 | 51533 | 215622_x_at | -0.1063 | 0.3133 | |
| GSE23400 | PHF7 | 51533 | 215622_x_at | -0.2241 | 0.0000 | |
| GSE26886 | PHF7 | 51533 | 215622_x_at | -0.4549 | 0.0008 | |
| GSE29001 | PHF7 | 51533 | 215622_x_at | -0.2687 | 0.0932 | |
| GSE38129 | PHF7 | 51533 | 215622_x_at | -0.2081 | 0.0298 | |
| GSE45670 | PHF7 | 51533 | 221611_s_at | -0.1221 | 0.2948 | |
| GSE53622 | PHF7 | 51533 | 26508 | -0.3865 | 0.0000 | |
| GSE53624 | PHF7 | 51533 | 26508 | -0.2016 | 0.0088 | |
| GSE63941 | PHF7 | 51533 | 215622_x_at | -0.3037 | 0.0714 | |
| GSE77861 | PHF7 | 51533 | 221611_s_at | -0.2081 | 0.0670 | |
| GSE97050 | PHF7 | 51533 | A_23_P80684 | -0.0783 | 0.7316 | |
| SRP007169 | PHF7 | 51533 | RNAseq | 0.4052 | 0.4826 | |
| SRP064894 | PHF7 | 51533 | RNAseq | 0.2055 | 0.3155 | |
| SRP133303 | PHF7 | 51533 | RNAseq | -0.3979 | 0.0315 | |
| SRP159526 | PHF7 | 51533 | RNAseq | -0.2311 | 0.5447 | |
| SRP193095 | PHF7 | 51533 | RNAseq | -0.4566 | 0.0003 | |
| SRP219564 | PHF7 | 51533 | RNAseq | -0.3673 | 0.4565 | |
| TCGA | PHF7 | 51533 | RNAseq | -0.0695 | 0.5106 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by PHF7 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PHF7:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PHF7 | 51533 | 0 | 18 | 12 | |
| GSE20123 | PHF7 | 51533 | 0 | 19 | 11 | |
| GSE43470 | PHF7 | 51533 | 0 | 18 | 25 | |
| GSE46452 | PHF7 | 51533 | 2 | 17 | 40 | |
| GSE47630 | PHF7 | 51533 | 1 | 24 | 15 | |
| GSE54993 | PHF7 | 51533 | 6 | 2 | 62 | |
| GSE54994 | PHF7 | 51533 | 0 | 33 | 20 | |
| GSE60625 | PHF7 | 51533 | 5 | 0 | 6 | |
| GSE74703 | PHF7 | 51533 | 0 | 14 | 22 | |
| GSE74704 | PHF7 | 51533 | 0 | 12 | 8 | |
| TCGA | PHF7 | 51533 | 0 | 78 | 18 |
Total number of gains: 14; Total number of losses: 235; Total Number of normals: 239.
Somatic mutations of PHF7:
Generating mutation plots.
Highly correlated genes for PHF7:
Showing top 20/1050 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PHF7 | LELP1 | 0.836371 | 3 | 0 | 3 |
| PHF7 | CELF5 | 0.791972 | 3 | 0 | 3 |
| PHF7 | BEST4 | 0.770465 | 3 | 0 | 3 |
| PHF7 | GPR52 | 0.767406 | 4 | 0 | 4 |
| PHF7 | KLK3 | 0.764399 | 6 | 0 | 6 |
| PHF7 | TXNDC2 | 0.759265 | 3 | 0 | 3 |
| PHF7 | KIR3DL3 | 0.751988 | 5 | 0 | 5 |
| PHF7 | VEPH1 | 0.748734 | 3 | 0 | 3 |
| PHF7 | ACR | 0.747919 | 5 | 0 | 5 |
| PHF7 | MAP3K10 | 0.747038 | 5 | 0 | 5 |
| PHF7 | C11orf86 | 0.74357 | 3 | 0 | 3 |
| PHF7 | ANKRD33 | 0.74159 | 4 | 0 | 3 |
| PHF7 | CER1 | 0.741267 | 4 | 0 | 4 |
| PHF7 | KCNQ4 | 0.73849 | 5 | 0 | 4 |
| PHF7 | IL9R | 0.737974 | 6 | 0 | 6 |
| PHF7 | PRG3 | 0.732865 | 5 | 0 | 5 |
| PHF7 | TBC1D10C | 0.732768 | 3 | 0 | 3 |
| PHF7 | C11orf16 | 0.732694 | 5 | 0 | 5 |
| PHF7 | SMCP | 0.732284 | 5 | 0 | 5 |
| PHF7 | NGB | 0.730795 | 5 | 0 | 5 |
For details and further investigation, click here
