| Full name: SPATA3 antisense RNA 1 (head to head) | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 2q37.1 | ||
| Entrez ID: 348761 | HGNC ID: HGNC:28013 | Ensembl Gene: ENSG00000238062 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SPATA3-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SPATA3-AS1 | 348761 | 240590_at | -0.0394 | 0.8982 | |
| GSE26886 | SPATA3-AS1 | 348761 | 240590_at | -0.1151 | 0.2170 | |
| GSE45670 | SPATA3-AS1 | 348761 | 240590_at | -0.0413 | 0.6610 | |
| GSE53622 | SPATA3-AS1 | 348761 | 20291 | 0.0572 | 0.6100 | |
| GSE53624 | SPATA3-AS1 | 348761 | 20291 | -0.1591 | 0.1233 | |
| GSE63941 | SPATA3-AS1 | 348761 | 240590_at | -0.1238 | 0.4304 | |
| GSE77861 | SPATA3-AS1 | 348761 | 240590_at | -0.1647 | 0.0814 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SPATA3-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of SPATA3-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SPATA3-AS1 | 348761 | 1 | 13 | 16 | |
| GSE20123 | SPATA3-AS1 | 348761 | 1 | 12 | 17 | |
| GSE43470 | SPATA3-AS1 | 348761 | 1 | 8 | 34 | |
| GSE46452 | SPATA3-AS1 | 348761 | 0 | 5 | 54 | |
| GSE47630 | SPATA3-AS1 | 348761 | 4 | 5 | 31 | |
| GSE54993 | SPATA3-AS1 | 348761 | 2 | 2 | 66 | |
| GSE54994 | SPATA3-AS1 | 348761 | 6 | 11 | 36 | |
| GSE60625 | SPATA3-AS1 | 348761 | 0 | 3 | 8 | |
| GSE74703 | SPATA3-AS1 | 348761 | 1 | 6 | 29 | |
| GSE74704 | SPATA3-AS1 | 348761 | 1 | 5 | 14 |
Total number of gains: 17; Total number of losses: 70; Total Number of normals: 305.
Somatic mutations of SPATA3-AS1:
Generating mutation plots.
Highly correlated genes for SPATA3-AS1:
Showing top 20/72 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SPATA3-AS1 | C1orf167 | 0.717826 | 3 | 0 | 3 |
| SPATA3-AS1 | IGSF9B | 0.668934 | 3 | 0 | 3 |
| SPATA3-AS1 | CCDC116 | 0.66528 | 3 | 0 | 3 |
| SPATA3-AS1 | CD300LG | 0.658274 | 3 | 0 | 3 |
| SPATA3-AS1 | PRRX2-AS1 | 0.646597 | 3 | 0 | 3 |
| SPATA3-AS1 | ACACB | 0.644719 | 3 | 0 | 3 |
| SPATA3-AS1 | MT1G | 0.642887 | 3 | 0 | 3 |
| SPATA3-AS1 | MT1H | 0.642266 | 3 | 0 | 3 |
| SPATA3-AS1 | NKD1 | 0.640785 | 4 | 0 | 3 |
| SPATA3-AS1 | PDZD3 | 0.632493 | 3 | 0 | 3 |
| SPATA3-AS1 | SP7 | 0.629846 | 3 | 0 | 3 |
| SPATA3-AS1 | DPEP3 | 0.627026 | 4 | 0 | 3 |
| SPATA3-AS1 | SAMD14 | 0.614403 | 3 | 0 | 3 |
| SPATA3-AS1 | HUS1B | 0.607614 | 3 | 0 | 3 |
| SPATA3-AS1 | MT1F | 0.60699 | 3 | 0 | 3 |
| SPATA3-AS1 | OR1F1 | 0.606981 | 4 | 0 | 3 |
| SPATA3-AS1 | MT1X | 0.604728 | 3 | 0 | 3 |
| SPATA3-AS1 | ANO2 | 0.604229 | 3 | 0 | 3 |
| SPATA3-AS1 | MT4 | 0.596651 | 4 | 0 | 4 |
| SPATA3-AS1 | PRR29 | 0.589882 | 5 | 0 | 4 |
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