| Full name: TFAP2A antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 6p24.3 | ||
| Entrez ID: 100130275 | HGNC ID: HGNC:40579 | Ensembl Gene: ENSG00000229950 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TFAP2A-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TFAP2A-AS1 | 100130275 | 1557070_at | -0.1668 | 0.4684 | |
| GSE26886 | TFAP2A-AS1 | 100130275 | 1557070_at | 0.2792 | 0.0366 | |
| GSE45670 | TFAP2A-AS1 | 100130275 | 1557070_at | 0.2167 | 0.0150 | |
| GSE53622 | TFAP2A-AS1 | 100130275 | 81484 | 0.2925 | 0.0205 | |
| GSE53624 | TFAP2A-AS1 | 100130275 | 81484 | 0.2441 | 0.0016 | |
| GSE63941 | TFAP2A-AS1 | 100130275 | 1557070_at | 0.3557 | 0.0464 | |
| GSE77861 | TFAP2A-AS1 | 100130275 | 1557070_at | -0.1799 | 0.0592 | |
| SRP133303 | TFAP2A-AS1 | 100130275 | RNAseq | 0.0501 | 0.8425 | |
| SRP219564 | TFAP2A-AS1 | 100130275 | RNAseq | -0.1045 | 0.8518 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TFAP2A-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TFAP2A-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TFAP2A-AS1 | 100130275 | 4 | 7 | 19 | |
| GSE20123 | TFAP2A-AS1 | 100130275 | 4 | 7 | 19 | |
| GSE43470 | TFAP2A-AS1 | 100130275 | 8 | 2 | 33 | |
| GSE46452 | TFAP2A-AS1 | 100130275 | 1 | 10 | 48 | |
| GSE47630 | TFAP2A-AS1 | 100130275 | 7 | 8 | 25 | |
| GSE54993 | TFAP2A-AS1 | 100130275 | 1 | 1 | 68 | |
| GSE54994 | TFAP2A-AS1 | 100130275 | 10 | 3 | 40 | |
| GSE60625 | TFAP2A-AS1 | 100130275 | 0 | 1 | 10 | |
| GSE74703 | TFAP2A-AS1 | 100130275 | 7 | 2 | 27 | |
| GSE74704 | TFAP2A-AS1 | 100130275 | 2 | 3 | 15 |
Total number of gains: 44; Total number of losses: 44; Total Number of normals: 304.
Somatic mutations of TFAP2A-AS1:
Generating mutation plots.
Highly correlated genes for TFAP2A-AS1:
Showing top 20/28 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TFAP2A-AS1 | CACNG2 | 0.672744 | 4 | 0 | 4 |
| TFAP2A-AS1 | FAM95B1 | 0.667653 | 3 | 0 | 3 |
| TFAP2A-AS1 | BLOC1S1 | 0.6496 | 3 | 0 | 3 |
| TFAP2A-AS1 | NR5A1 | 0.63055 | 4 | 0 | 4 |
| TFAP2A-AS1 | CLIP1-AS1 | 0.628217 | 4 | 0 | 3 |
| TFAP2A-AS1 | VCX2 | 0.604016 | 3 | 0 | 3 |
| TFAP2A-AS1 | RHEBL1 | 0.600595 | 3 | 0 | 3 |
| TFAP2A-AS1 | NXPE1 | 0.600113 | 3 | 0 | 3 |
| TFAP2A-AS1 | RETN | 0.598994 | 3 | 0 | 3 |
| TFAP2A-AS1 | FASLG | 0.593557 | 3 | 0 | 3 |
| TFAP2A-AS1 | ARHGEF7-IT1 | 0.591609 | 3 | 0 | 3 |
| TFAP2A-AS1 | PMFBP1 | 0.590637 | 3 | 0 | 3 |
| TFAP2A-AS1 | MEGF10 | 0.588537 | 3 | 0 | 3 |
| TFAP2A-AS1 | C2orf16 | 0.577366 | 3 | 0 | 3 |
| TFAP2A-AS1 | MACROD1 | 0.574529 | 3 | 0 | 3 |
| TFAP2A-AS1 | SMCP | 0.566443 | 3 | 0 | 3 |
| TFAP2A-AS1 | TTC6 | 0.565897 | 3 | 0 | 3 |
| TFAP2A-AS1 | LGALS4 | 0.560117 | 3 | 0 | 3 |
| TFAP2A-AS1 | ICOSLG | 0.551732 | 3 | 0 | 3 |
| TFAP2A-AS1 | SOX10 | 0.550762 | 3 | 0 | 3 |
For details and further investigation, click here
