| Full name: TMCC1 antisense RNA 1 (head to head) | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 3q22.1 | ||
| Entrez ID: 100507032 | HGNC ID: HGNC:49060 | Ensembl Gene: ENSG00000271270 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TMCC1-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TMCC1-AS1 | 100507032 | 1558481_s_at | 0.0449 | 0.8521 | |
| GSE26886 | TMCC1-AS1 | 100507032 | 1558481_s_at | 0.0173 | 0.8758 | |
| GSE45670 | TMCC1-AS1 | 100507032 | 1558481_s_at | 0.0323 | 0.7208 | |
| GSE53622 | TMCC1-AS1 | 100507032 | 12605 | 0.5832 | 0.0003 | |
| GSE53624 | TMCC1-AS1 | 100507032 | 12605 | 0.5568 | 0.0001 | |
| GSE63941 | TMCC1-AS1 | 100507032 | 1558481_s_at | 0.1268 | 0.4556 | |
| GSE77861 | TMCC1-AS1 | 100507032 | 1558481_s_at | -0.0633 | 0.5048 | |
| SRP007169 | TMCC1-AS1 | 100507032 | RNAseq | 2.3546 | 0.0169 | |
| SRP064894 | TMCC1-AS1 | 100507032 | RNAseq | 0.6096 | 0.0027 | |
| SRP133303 | TMCC1-AS1 | 100507032 | RNAseq | 0.0787 | 0.5212 | |
| SRP159526 | TMCC1-AS1 | 100507032 | RNAseq | 0.4351 | 0.2508 | |
| SRP193095 | TMCC1-AS1 | 100507032 | RNAseq | 0.2329 | 0.0478 | |
| SRP219564 | TMCC1-AS1 | 100507032 | RNAseq | 0.0254 | 0.9497 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by TMCC1-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TMCC1-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TMCC1-AS1 | 100507032 | 17 | 0 | 13 | |
| GSE20123 | TMCC1-AS1 | 100507032 | 17 | 0 | 13 | |
| GSE43470 | TMCC1-AS1 | 100507032 | 19 | 0 | 24 | |
| GSE46452 | TMCC1-AS1 | 100507032 | 14 | 5 | 40 | |
| GSE47630 | TMCC1-AS1 | 100507032 | 18 | 3 | 19 | |
| GSE54993 | TMCC1-AS1 | 100507032 | 2 | 8 | 60 | |
| GSE54994 | TMCC1-AS1 | 100507032 | 32 | 3 | 18 | |
| GSE60625 | TMCC1-AS1 | 100507032 | 0 | 6 | 5 | |
| GSE74703 | TMCC1-AS1 | 100507032 | 17 | 0 | 19 | |
| GSE74704 | TMCC1-AS1 | 100507032 | 13 | 0 | 7 |
Total number of gains: 149; Total number of losses: 25; Total Number of normals: 218.
Somatic mutations of TMCC1-AS1:
Generating mutation plots.
Highly correlated genes for TMCC1-AS1:
Showing top 20/65 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TMCC1-AS1 | USP2-AS1 | 0.78376 | 3 | 0 | 3 |
| TMCC1-AS1 | SIM1 | 0.752739 | 3 | 0 | 3 |
| TMCC1-AS1 | LINC00894 | 0.745824 | 3 | 0 | 3 |
| TMCC1-AS1 | LINC01432 | 0.736319 | 3 | 0 | 3 |
| TMCC1-AS1 | TTTY5 | 0.732235 | 4 | 0 | 4 |
| TMCC1-AS1 | ST8SIA5 | 0.714532 | 3 | 0 | 3 |
| TMCC1-AS1 | SYCN | 0.706284 | 3 | 0 | 3 |
| TMCC1-AS1 | PLXNB3 | 0.703472 | 3 | 0 | 3 |
| TMCC1-AS1 | KCNJ9 | 0.683801 | 3 | 0 | 3 |
| TMCC1-AS1 | ST8SIA1 | 0.680633 | 3 | 0 | 3 |
| TMCC1-AS1 | LINC01007 | 0.675168 | 3 | 0 | 3 |
| TMCC1-AS1 | PAX6 | 0.674278 | 3 | 0 | 3 |
| TMCC1-AS1 | DLGAP2-AS1 | 0.672548 | 3 | 0 | 3 |
| TMCC1-AS1 | LINC00862 | 0.672256 | 4 | 0 | 3 |
| TMCC1-AS1 | LINC01281 | 0.671465 | 4 | 0 | 3 |
| TMCC1-AS1 | DLGAP1-AS1 | 0.657893 | 3 | 0 | 3 |
| TMCC1-AS1 | CORO6 | 0.656188 | 3 | 0 | 3 |
| TMCC1-AS1 | AKR1D1 | 0.655258 | 4 | 0 | 4 |
| TMCC1-AS1 | MC1R | 0.642846 | 3 | 0 | 3 |
| TMCC1-AS1 | HECW1-IT1 | 0.641563 | 3 | 0 | 3 |
For details and further investigation, click here
