KCNJ9

 

Full name: potassium inwardly rectifying channel subfamily J member 9 Alias Symbol: Kir3.3|GIRK3
Type: protein-coding gene Cytoband: 1q23.2
Entrez ID: 3765 HGNC ID: HGNC:6270 Ensembl Gene: ENSG00000162728 OMIM ID: 600932
Drug and gene relationship at DGIdb
Screen Evidence:

 

KCNJ9 involved pathways:

KEGG pathway Description View
hsa04713Circadian entrainment
hsa04723Retrograde endocannabinoid signaling
hsa04726Serotonergic synapse
hsa04728Dopaminergic synapse
hsa04915Estrogen signaling pathway
hsa04921Oxytocin signaling pathway
hsa05032Morphine addiction

 

Expression of KCNJ9:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KCNJ9 3765 207527_at 0.0475 0.8532
GSE20347 KCNJ9 3765 207527_at 0.0794 0.2283
GSE23400 KCNJ9 3765 207527_at -0.0751 0.0663
GSE26886 KCNJ9 3765 207527_at -0.0012 0.9930
GSE29001 KCNJ9 3765 207527_at -0.0716 0.5803
GSE38129 KCNJ9 3765 207527_at -0.0136 0.8551
GSE45670 KCNJ9 3765 207527_at -0.0247 0.8103
GSE53622 KCNJ9 3765 134682 0.4791 0.0037
GSE53624 KCNJ9 3765 134682 0.1141 0.6081
GSE63941 KCNJ9 3765 207527_at 0.0515 0.7485
GSE77861 KCNJ9 3765 207527_at 0.0575 0.6869
SRP133303 KCNJ9 3765 RNAseq -1.1310 0.0003
TCGA KCNJ9 3765 RNAseq -0.3693 0.6168

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by KCNJ9 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KCNJ9:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KCNJ9 3765 10 0 20
GSE20123 KCNJ9 3765 10 0 20
GSE43470 KCNJ9 3765 7 2 34
GSE46452 KCNJ9 3765 2 1 56
GSE47630 KCNJ9 3765 15 0 25
GSE54993 KCNJ9 3765 0 5 65
GSE54994 KCNJ9 3765 16 0 37
GSE60625 KCNJ9 3765 0 0 11
GSE74703 KCNJ9 3765 7 2 27
GSE74704 KCNJ9 3765 4 0 16
TCGA KCNJ9 3765 44 3 49

Total number of gains: 115; Total number of losses: 13; Total Number of normals: 360.  


 

Somatic mutations of KCNJ9:

 

Generating mutation plots.

 

Highly correlated genes for KCNJ9:

 

Showing top 20/838 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KCNJ9SLC25A530.750531303
KCNJ9LRRTM10.746517303
KCNJ9VAX20.734828404
KCNJ9TTTY50.734647303
KCNJ9RPS6KA60.722782303
KCNJ9CDRT150.71848404
KCNJ9SPACA30.711492303
KCNJ9DEFB1320.71145303
KCNJ9CRHR20.708103605
KCNJ9CHMP60.707328303
KCNJ9SYT90.705735303
KCNJ9TNNI10.700127505
KCNJ9CDH240.699719403
KCNJ9SUN50.699437303
KCNJ9GPSM10.696581303
KCNJ9SIRPB10.694498605
KCNJ9TMEM1050.694241303
KCNJ9LINC004080.691995404
KCNJ9TMEM63B0.690328303
KCNJ9LGALS120.688712303

For details and further investigation, click here