| Full name: solute carrier family 6 member 17 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 1p13.3 | ||
| Entrez ID: 388662 | HGNC ID: HGNC:31399 | Ensembl Gene: ENSG00000197106 | OMIM ID: 610299 |
| Drug and gene relationship at DGIdb | |||
Expression of SLC6A17:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SLC6A17 | 388662 | 233287_at | -0.0456 | 0.9063 | |
| GSE26886 | SLC6A17 | 388662 | 229925_at | 0.0536 | 0.5592 | |
| GSE45670 | SLC6A17 | 388662 | 233287_at | 0.0260 | 0.8104 | |
| GSE53622 | SLC6A17 | 388662 | 99856 | -0.6370 | 0.0002 | |
| GSE53624 | SLC6A17 | 388662 | 99856 | -0.3569 | 0.0016 | |
| GSE63941 | SLC6A17 | 388662 | 233287_at | 0.1664 | 0.2772 | |
| GSE77861 | SLC6A17 | 388662 | 229925_at | -0.0333 | 0.7721 | |
| SRP133303 | SLC6A17 | 388662 | RNAseq | -0.0201 | 0.9236 | |
| SRP159526 | SLC6A17 | 388662 | RNAseq | -0.0415 | 0.9326 | |
| SRP219564 | SLC6A17 | 388662 | RNAseq | 2.1164 | 0.0069 | |
| TCGA | SLC6A17 | 388662 | RNAseq | -0.3681 | 0.3620 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by SLC6A17 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SLC6A17:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SLC6A17 | 388662 | 0 | 11 | 19 | |
| GSE20123 | SLC6A17 | 388662 | 0 | 11 | 19 | |
| GSE43470 | SLC6A17 | 388662 | 0 | 9 | 34 | |
| GSE46452 | SLC6A17 | 388662 | 2 | 1 | 56 | |
| GSE47630 | SLC6A17 | 388662 | 9 | 5 | 26 | |
| GSE54993 | SLC6A17 | 388662 | 0 | 1 | 69 | |
| GSE54994 | SLC6A17 | 388662 | 7 | 4 | 42 | |
| GSE60625 | SLC6A17 | 388662 | 0 | 0 | 11 | |
| GSE74703 | SLC6A17 | 388662 | 0 | 7 | 29 | |
| GSE74704 | SLC6A17 | 388662 | 0 | 7 | 13 | |
| TCGA | SLC6A17 | 388662 | 9 | 27 | 60 |
Total number of gains: 27; Total number of losses: 83; Total Number of normals: 378.
Somatic mutations of SLC6A17:
Generating mutation plots.
Highly correlated genes for SLC6A17:
Showing top 20/27 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SLC6A17 | TAGAP | 0.69007 | 3 | 0 | 3 |
| SLC6A17 | AQP8 | 0.652351 | 3 | 0 | 3 |
| SLC6A17 | PROP1 | 0.649862 | 3 | 0 | 3 |
| SLC6A17 | G6PC2 | 0.645581 | 3 | 0 | 3 |
| SLC6A17 | PACS2 | 0.636509 | 3 | 0 | 3 |
| SLC6A17 | LINC00661 | 0.635023 | 3 | 0 | 3 |
| SLC6A17 | TNFRSF13C | 0.625886 | 3 | 0 | 3 |
| SLC6A17 | OR5P3 | 0.620775 | 3 | 0 | 3 |
| SLC6A17 | FHAD1 | 0.605782 | 3 | 0 | 3 |
| SLC6A17 | TMPRSS6 | 0.596169 | 3 | 0 | 3 |
| SLC6A17 | INSL3 | 0.595384 | 4 | 0 | 3 |
| SLC6A17 | SIGLEC1 | 0.590956 | 3 | 0 | 3 |
| SLC6A17 | PRM1 | 0.589533 | 4 | 0 | 4 |
| SLC6A17 | C14orf180 | 0.588769 | 3 | 0 | 3 |
| SLC6A17 | GAP43 | 0.587925 | 3 | 0 | 3 |
| SLC6A17 | CCL25 | 0.576228 | 4 | 0 | 3 |
| SLC6A17 | DNAAF1 | 0.572758 | 4 | 0 | 3 |
| SLC6A17 | PTGIR | 0.571432 | 3 | 0 | 3 |
| SLC6A17 | KCNK4 | 0.571094 | 3 | 0 | 3 |
| SLC6A17 | TEKT1 | 0.56408 | 3 | 0 | 3 |
For details and further investigation, click here
