TMEM190

 

Full name: transmembrane protein 190 Alias Symbol: MDAC1
Type: protein-coding gene Cytoband: 19q13.42
Entrez ID: 147744 HGNC ID: HGNC:29632 Ensembl Gene: ENSG00000160472 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of TMEM190:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TMEM190 147744 1552594_at -0.2115 0.4030
GSE26886 TMEM190 147744 1552594_at 0.0260 0.8919
GSE45670 TMEM190 147744 1552594_at 0.0782 0.5457
GSE63941 TMEM190 147744 1552594_at -0.0386 0.8693
GSE77861 TMEM190 147744 1552594_at -0.0538 0.7049
GSE97050 TMEM190 147744 A_23_P107775 0.0951 0.6594
TCGA TMEM190 147744 RNAseq 0.9539 0.2142

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by TMEM190 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of TMEM190:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TMEM190 147744 3 4 23
GSE20123 TMEM190 147744 3 3 24
GSE43470 TMEM190 147744 3 11 29
GSE46452 TMEM190 147744 45 1 13
GSE47630 TMEM190 147744 8 6 26
GSE54993 TMEM190 147744 17 4 49
GSE54994 TMEM190 147744 4 13 36
GSE60625 TMEM190 147744 9 0 2
GSE74703 TMEM190 147744 3 7 26
GSE74704 TMEM190 147744 3 1 16
TCGA TMEM190 147744 20 14 62

Total number of gains: 118; Total number of losses: 64; Total Number of normals: 306.  


 

Somatic mutations of TMEM190:

 

Generating mutation plots.

 

Highly correlated genes for TMEM190:

 

Showing top 20/88 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TMEM190GH20.714389303
TMEM190MICALL20.712016303
TMEM190MRAP0.708343303
TMEM190SNAI10.696008303
TMEM190HGFAC0.690281303
TMEM190CYP17A10.678561303
TMEM190PRB10.66695303
TMEM190ASCL10.662011303
TMEM190ROBO40.661969303
TMEM190TNFRSF13C0.653608303
TMEM190CEACAM30.649325303
TMEM190SYN10.641353303
TMEM190SSPO0.640418303
TMEM190OR2H20.639172303
TMEM190MPL0.637561303
TMEM190C2CD4B0.63506303
TMEM190SLC5A20.632722303
TMEM190ARHGDIG0.628378403
TMEM190GATA60.62371303
TMEM190HRH20.621243303

For details and further investigation, click here