TRDN

 

Full name: triadin Alias Symbol: TRISK
Type: protein-coding gene Cytoband: 6q22.31
Entrez ID: 10345 HGNC ID: HGNC:12261 Ensembl Gene: ENSG00000186439 OMIM ID: 603283
Drug and gene relationship at DGIdb

 

Expression of TRDN:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TRDN 10345 222919_at 0.4048 0.4762
GSE20347 TRDN 10345 222287_at -0.0103 0.8333
GSE23400 TRDN 10345 222287_at -0.0415 0.0479
GSE26886 TRDN 10345 222919_at 1.1577 0.0210
GSE29001 TRDN 10345 222287_at 0.0694 0.5942
GSE38129 TRDN 10345 222287_at -0.0249 0.5877
GSE45670 TRDN 10345 222919_at 0.3196 0.2956
GSE53622 TRDN 10345 14140 -0.0085 0.9666
GSE53624 TRDN 10345 14140 -0.1653 0.2275
GSE63941 TRDN 10345 222919_at 0.1067 0.8162
GSE77861 TRDN 10345 222919_at 0.1026 0.4543
GSE97050 TRDN 10345 A_33_P3248799 -0.5721 0.3097
TCGA TRDN 10345 RNAseq 3.8910 0.0004

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by TRDN expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TRDN:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TRDN 10345 1 4 25
GSE20123 TRDN 10345 2 3 25
GSE43470 TRDN 10345 5 1 37
GSE46452 TRDN 10345 2 11 46
GSE47630 TRDN 10345 9 4 27
GSE54993 TRDN 10345 3 2 65
GSE54994 TRDN 10345 8 8 37
GSE60625 TRDN 10345 0 1 10
GSE74703 TRDN 10345 4 1 31
GSE74704 TRDN 10345 0 1 19
TCGA TRDN 10345 10 19 67

Total number of gains: 44; Total number of losses: 55; Total Number of normals: 389.  


 

Somatic mutations of TRDN:

 

Generating mutation plots.

 

Highly correlated genes for TRDN:

 

Showing top 20/188 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TRDNPHF80.747723303
TRDNALG100.723368303
TRDNTMEM2160.709348303
TRDNRNF1750.70552303
TRDNKIAA18410.704604303
TRDNCLIC60.704035403
TRDNFAM161A0.69876404
TRDNCOA50.697204303
TRDNTET10.695209303
TRDNBCAT20.694275303
TRDNCNNM20.69249303
TRDNCEP2900.68539303
TRDNPOLRMT0.682913403
TRDNNPTX10.682141303
TRDNRSBN1L0.681781303
TRDNZNF8050.679968303
TRDNRNF1380.677456303
TRDNMAP7D20.674433303
TRDNZNF6270.674264303
TRDNRHNO10.671338303

For details and further investigation, click here