| Full name: ZBED3 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 5q13.3 | ||
| Entrez ID: 728723 | HGNC ID: HGNC:44188 | Ensembl Gene: ENSG00000250802 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of ZBED3-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ZBED3-AS1 | 728723 | 241423_at | 0.1556 | 0.4612 | |
| GSE26886 | ZBED3-AS1 | 728723 | 241423_at | 0.2088 | 0.0643 | |
| GSE45670 | ZBED3-AS1 | 728723 | 241423_at | 0.1780 | 0.0373 | |
| GSE53622 | ZBED3-AS1 | 728723 | 16020 | -0.0460 | 0.6524 | |
| GSE53624 | ZBED3-AS1 | 728723 | 16020 | 0.0252 | 0.7425 | |
| GSE63941 | ZBED3-AS1 | 728723 | 241423_at | 0.2233 | 0.3462 | |
| GSE77861 | ZBED3-AS1 | 728723 | 241423_at | -0.0242 | 0.8611 | |
| SRP133303 | ZBED3-AS1 | 728723 | RNAseq | 0.2632 | 0.3210 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by ZBED3-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of ZBED3-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ZBED3-AS1 | 728723 | 1 | 13 | 16 | |
| GSE20123 | ZBED3-AS1 | 728723 | 1 | 13 | 16 | |
| GSE43470 | ZBED3-AS1 | 728723 | 1 | 13 | 29 | |
| GSE46452 | ZBED3-AS1 | 728723 | 0 | 28 | 31 | |
| GSE47630 | ZBED3-AS1 | 728723 | 1 | 19 | 20 | |
| GSE54993 | ZBED3-AS1 | 728723 | 8 | 1 | 61 | |
| GSE54994 | ZBED3-AS1 | 728723 | 1 | 19 | 33 | |
| GSE60625 | ZBED3-AS1 | 728723 | 0 | 0 | 11 | |
| GSE74703 | ZBED3-AS1 | 728723 | 1 | 9 | 26 | |
| GSE74704 | ZBED3-AS1 | 728723 | 1 | 6 | 13 |
Total number of gains: 15; Total number of losses: 121; Total Number of normals: 256.
Somatic mutations of ZBED3-AS1:
Generating mutation plots.
Highly correlated genes for ZBED3-AS1:
Showing top 20/159 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ZBED3-AS1 | APOC2 | 0.750899 | 3 | 0 | 3 |
| ZBED3-AS1 | SPRED3 | 0.701176 | 3 | 0 | 3 |
| ZBED3-AS1 | RASL10B | 0.697219 | 4 | 0 | 4 |
| ZBED3-AS1 | GPR61 | 0.6834 | 3 | 0 | 3 |
| ZBED3-AS1 | GPC2 | 0.676191 | 3 | 0 | 3 |
| ZBED3-AS1 | CACNG2 | 0.661907 | 3 | 0 | 3 |
| ZBED3-AS1 | TRAPPC3L | 0.659208 | 3 | 0 | 3 |
| ZBED3-AS1 | EVX1 | 0.655377 | 4 | 0 | 4 |
| ZBED3-AS1 | ZNF653 | 0.652427 | 3 | 0 | 3 |
| ZBED3-AS1 | SIM1 | 0.649366 | 3 | 0 | 3 |
| ZBED3-AS1 | RIT2 | 0.635337 | 3 | 0 | 3 |
| ZBED3-AS1 | CLDN9 | 0.633308 | 4 | 0 | 4 |
| ZBED3-AS1 | RBM17 | 0.631403 | 3 | 0 | 3 |
| ZBED3-AS1 | HKDC1 | 0.626003 | 3 | 0 | 3 |
| ZBED3-AS1 | SUSD2 | 0.624506 | 3 | 0 | 3 |
| ZBED3-AS1 | DCDC2B | 0.620287 | 3 | 0 | 3 |
| ZBED3-AS1 | CDK16 | 0.617835 | 3 | 0 | 3 |
| ZBED3-AS1 | YJEFN3 | 0.617559 | 5 | 0 | 4 |
| ZBED3-AS1 | SLC26A1 | 0.616098 | 4 | 0 | 3 |
| ZBED3-AS1 | RBAKDN | 0.615402 | 4 | 0 | 4 |
For details and further investigation, click here
