ZNF12

 

Full name: zinc finger protein 12 Alias Symbol: KOX3|GIOT-3
Type: protein-coding gene Cytoband: 7p22.1
Entrez ID: 7559 HGNC ID: HGNC:12902 Ensembl Gene: ENSG00000164631 OMIM ID: 194536
Drug and gene relationship at DGIdb

 

Expression of ZNF12:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF12 7559 226015_at -0.0580 0.8837
GSE20347 ZNF12 7559 219571_s_at 0.3469 0.0130
GSE23400 ZNF12 7559 219571_s_at 0.3228 0.0001
GSE26886 ZNF12 7559 226015_at 0.7201 0.0170
GSE29001 ZNF12 7559 219571_s_at -0.0116 0.9838
GSE38129 ZNF12 7559 219571_s_at 0.2593 0.2809
GSE45670 ZNF12 7559 226015_at -0.1152 0.3840
GSE53622 ZNF12 7559 130313 0.1429 0.0120
GSE53624 ZNF12 7559 130313 0.0169 0.7832
GSE63941 ZNF12 7559 226015_at 0.0372 0.9544
GSE77861 ZNF12 7559 226015_at 0.1502 0.5917
GSE97050 ZNF12 7559 A_23_P31335 -0.1048 0.8087
SRP007169 ZNF12 7559 RNAseq 0.1286 0.7166
SRP008496 ZNF12 7559 RNAseq 0.6200 0.0207
SRP064894 ZNF12 7559 RNAseq -0.1649 0.4160
SRP133303 ZNF12 7559 RNAseq 0.1603 0.2322
SRP159526 ZNF12 7559 RNAseq 0.0353 0.8388
SRP193095 ZNF12 7559 RNAseq -0.1218 0.2267
SRP219564 ZNF12 7559 RNAseq -0.1026 0.7568
TCGA ZNF12 7559 RNAseq 0.0261 0.6035

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ZNF12 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZNF12:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF12 7559 14 1 15
GSE20123 ZNF12 7559 14 1 15
GSE43470 ZNF12 7559 7 1 35
GSE46452 ZNF12 7559 13 1 45
GSE47630 ZNF12 7559 9 1 30
GSE54993 ZNF12 7559 0 6 64
GSE54994 ZNF12 7559 20 1 32
GSE60625 ZNF12 7559 0 0 11
GSE74703 ZNF12 7559 7 0 29
GSE74704 ZNF12 7559 9 0 11
TCGA ZNF12 7559 56 4 36

Total number of gains: 149; Total number of losses: 16; Total Number of normals: 323.  


 

Somatic mutations of ZNF12:

 

Generating mutation plots.

 

Highly correlated genes for ZNF12:

 

Showing top 20/401 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF12PAWR0.849888303
ZNF12ZNF6550.779261303
ZNF12CCNY0.736897303
ZNF12ATG4C0.728011303
ZNF12VAMP30.721078303
ZNF12ZNF6160.717838303
ZNF12ZSCAN210.711282303
ZNF12NSMCE10.709481303
ZNF12SLC44A10.704198505
ZNF12CDKL30.702929303
ZNF12DOCK70.702586404
ZNF12WHAMM0.702239403
ZNF12ZNF6270.699955404
ZNF12RAP2A0.695993303
ZNF12AGBL50.694725303
ZNF12ZNF5430.693727303
ZNF12ANKRD270.689778303
ZNF12NUDT190.688836303
ZNF12FTSJ10.687221303
ZNF12HNRNPLL0.684227303

For details and further investigation, click here