WHAMM

 

Full name: WASP homolog associated with actin, golgi membranes and microtubules Alias Symbol: KIAA1971|WHAMM1
Type: protein-coding gene Cytoband: 15q25.2
Entrez ID: 123720 HGNC ID: HGNC:30493 Ensembl Gene: ENSG00000156232 OMIM ID: 612393
Drug and gene relationship at DGIdb

 

Expression of WHAMM:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 WHAMM 123720 228953_at -0.2191 0.6806
GSE26886 WHAMM 123720 228953_at 0.7921 0.0200
GSE45670 WHAMM 123720 228953_at -0.1263 0.3247
GSE53622 WHAMM 123720 25257 -0.5191 0.0000
GSE53624 WHAMM 123720 33508 -0.4544 0.0000
GSE63941 WHAMM 123720 228953_at -0.4502 0.3717
GSE77861 WHAMM 123720 228953_at -0.0271 0.9123
GSE97050 WHAMM 123720 A_24_P118489 -0.6091 0.0962
SRP007169 WHAMM 123720 RNAseq -0.6213 0.1032
SRP008496 WHAMM 123720 RNAseq -0.5486 0.0269
SRP064894 WHAMM 123720 RNAseq -0.5774 0.0000
SRP133303 WHAMM 123720 RNAseq -0.2010 0.0584
SRP159526 WHAMM 123720 RNAseq -0.5165 0.0107
SRP193095 WHAMM 123720 RNAseq -0.2059 0.0063
SRP219564 WHAMM 123720 RNAseq -0.1457 0.6355
TCGA WHAMM 123720 RNAseq -0.1016 0.0729

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by WHAMM expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of WHAMM:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 WHAMM 123720 7 1 22
GSE20123 WHAMM 123720 7 1 22
GSE43470 WHAMM 123720 4 4 35
GSE46452 WHAMM 123720 3 7 49
GSE47630 WHAMM 123720 8 10 22
GSE54993 WHAMM 123720 5 6 59
GSE54994 WHAMM 123720 5 7 41
GSE60625 WHAMM 123720 4 0 7
GSE74703 WHAMM 123720 4 2 30
GSE74704 WHAMM 123720 3 1 16
TCGA WHAMM 123720 15 14 67

Total number of gains: 65; Total number of losses: 53; Total Number of normals: 370.  


 

Somatic mutations of WHAMM:

 

Generating mutation plots.

 

Highly correlated genes for WHAMM:

 

Showing top 20/309 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
WHAMMNSMCE4A0.798115303
WHAMMLUC7L20.791768303
WHAMMGATAD10.78864303
WHAMMHERPUD20.788379303
WHAMMZFYVE90.781247303
WHAMMZNF7170.775269303
WHAMMSMC50.773216303
WHAMMFAM168A0.768224303
WHAMMTUBGCP40.762682303
WHAMMOCEL10.758319303
WHAMMFAM13A0.754141303
WHAMMTBC1D280.753848303
WHAMMCGRRF10.748136303
WHAMMIFT460.747576303
WHAMMCTPS20.73887403
WHAMMROGDI0.736785303
WHAMMEIF2D0.736233303
WHAMMERP270.732041303
WHAMMHIPK30.73197303
WHAMMMBD10.731677303

For details and further investigation, click here