ZNF616

 

Full name: zinc finger protein 616 Alias Symbol: MGC45556
Type: protein-coding gene Cytoband: 19q13.41
Entrez ID: 90317 HGNC ID: HGNC:28062 Ensembl Gene: ENSG00000204611 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ZNF616:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF616 90317 232137_at 0.1113 0.8743
GSE26886 ZNF616 90317 239007_at 0.5554 0.0049
GSE45670 ZNF616 90317 239007_at -0.0059 0.9813
GSE53622 ZNF616 90317 32689 0.1512 0.0572
GSE53624 ZNF616 90317 32689 0.1986 0.0609
GSE63941 ZNF616 90317 232137_at -0.4668 0.1168
GSE77861 ZNF616 90317 232137_at -0.1066 0.2848
GSE97050 ZNF616 90317 A_33_P3269806 0.0639 0.8732
SRP007169 ZNF616 90317 RNAseq 0.8544 0.0439
SRP008496 ZNF616 90317 RNAseq 0.9470 0.0019
SRP064894 ZNF616 90317 RNAseq 0.3818 0.0489
SRP133303 ZNF616 90317 RNAseq 0.2978 0.0478
SRP159526 ZNF616 90317 RNAseq 0.1791 0.5346
SRP193095 ZNF616 90317 RNAseq 0.0270 0.8301
SRP219564 ZNF616 90317 RNAseq -0.0586 0.8530
TCGA ZNF616 90317 RNAseq -0.1744 0.0106

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ZNF616 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZNF616:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF616 90317 3 5 22
GSE20123 ZNF616 90317 3 4 23
GSE43470 ZNF616 90317 2 12 29
GSE46452 ZNF616 90317 45 1 13
GSE47630 ZNF616 90317 9 6 25
GSE54993 ZNF616 90317 17 4 49
GSE54994 ZNF616 90317 4 14 35
GSE60625 ZNF616 90317 9 0 2
GSE74703 ZNF616 90317 2 8 26
GSE74704 ZNF616 90317 3 2 15
TCGA ZNF616 90317 15 20 61

Total number of gains: 112; Total number of losses: 76; Total Number of normals: 300.  


 

Somatic mutations of ZNF616:

 

Generating mutation plots.

 

Highly correlated genes for ZNF616:

 

Showing top 20/233 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF616TM9SF30.812684303
ZNF616GSPT20.796962303
ZNF616ERCC60.787576303
ZNF616UBA520.77889303
ZNF616GYG20.777529303
ZNF616PARG0.775367303
ZNF616MRPS18A0.771399303
ZNF616TMBIM60.761906303
ZNF616DUS3L0.754652303
ZNF616ZNF6680.751301303
ZNF616DHX400.748156303
ZNF616MRPL200.740288303
ZNF616PPCS0.735705303
ZNF616APOO0.727023303
ZNF616C2orf760.725921303
ZNF616ARL60.719235303
ZNF616USE10.718736303
ZNF616CSTF2T0.717919404
ZNF616ZNF120.717838303
ZNF616ZYG11A0.717416303

For details and further investigation, click here