ZNF543

 

Full name: zinc finger protein 543 Alias Symbol: DKFZp434H055
Type: protein-coding gene Cytoband: 19q13.43
Entrez ID: 125919 HGNC ID: HGNC:25281 Ensembl Gene: ENSG00000178229 OMIM ID: 616847
Drug and gene relationship at DGIdb

 

Expression of ZNF543:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF543 125919 240191_at -0.0432 0.8934
GSE26886 ZNF543 125919 240191_at 0.1098 0.4688
GSE45670 ZNF543 125919 240191_at -0.1424 0.0720
GSE53622 ZNF543 125919 6238 -0.2346 0.0059
GSE53624 ZNF543 125919 6238 -0.1691 0.0991
GSE63941 ZNF543 125919 240191_at 0.3099 0.0919
GSE77861 ZNF543 125919 240191_at -0.0554 0.5527
GSE97050 ZNF543 125919 A_32_P139229 0.1221 0.7032
SRP007169 ZNF543 125919 RNAseq -0.3896 0.2802
SRP008496 ZNF543 125919 RNAseq -0.2773 0.3942
SRP064894 ZNF543 125919 RNAseq -0.6770 0.0016
SRP133303 ZNF543 125919 RNAseq 0.0072 0.9670
SRP159526 ZNF543 125919 RNAseq 0.2192 0.4787
SRP193095 ZNF543 125919 RNAseq -0.1565 0.1905
SRP219564 ZNF543 125919 RNAseq -0.2299 0.4944
TCGA ZNF543 125919 RNAseq -0.0201 0.8101

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ZNF543 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZNF543:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF543 125919 2 4 24
GSE20123 ZNF543 125919 2 3 25
GSE43470 ZNF543 125919 2 9 32
GSE46452 ZNF543 125919 45 1 13
GSE47630 ZNF543 125919 8 6 26
GSE54993 ZNF543 125919 18 4 48
GSE54994 ZNF543 125919 5 12 36
GSE60625 ZNF543 125919 9 0 2
GSE74703 ZNF543 125919 2 6 28
GSE74704 ZNF543 125919 2 1 17
TCGA ZNF543 125919 21 16 59

Total number of gains: 116; Total number of losses: 62; Total Number of normals: 310.  


 

Somatic mutations of ZNF543:

 

Generating mutation plots.

 

Highly correlated genes for ZNF543:

 

Showing top 20/141 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF543ECHDC10.760759303
ZNF543PSEN10.747401303
ZNF543E2F80.743299303
ZNF543EXOC20.733636303
ZNF543PIK3R50.730772303
ZNF543VPS26A0.728217303
ZNF543BNIP10.727575303
ZNF543IMP30.725227303
ZNF543DNPEP0.7226303
ZNF543SLC25A400.712654303
ZNF543ASL0.710009303
ZNF543SDHB0.709457404
ZNF543ZNF3040.704417504
ZNF543MRPS18B0.702536403
ZNF543CNOT100.699264303
ZNF543ZNF3940.697263303
ZNF543MTO10.696757303
ZNF543LIPT10.696211303
ZNF543ZNF120.693727303
ZNF543ZW100.693604403

For details and further investigation, click here