ZNF654

 

Full name: zinc finger protein 654 Alias Symbol: FLJ10997|FLJ21142
Type: protein-coding gene Cytoband: 3p11.1
Entrez ID: 55279 HGNC ID: HGNC:25612 Ensembl Gene: ENSG00000175105 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ZNF654:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF654 55279 1556744_a_at 0.1719 0.8536
GSE20347 ZNF654 55279 219239_s_at -0.5228 0.0004
GSE23400 ZNF654 55279 219239_s_at -0.1493 0.0082
GSE26886 ZNF654 55279 241348_at -1.4490 0.0000
GSE29001 ZNF654 55279 219239_s_at -0.6068 0.1264
GSE38129 ZNF654 55279 219239_s_at -0.5439 0.0041
GSE45670 ZNF654 55279 241348_at -0.2187 0.2782
GSE53622 ZNF654 55279 21977 -0.8508 0.0000
GSE53624 ZNF654 55279 21977 -0.9318 0.0000
GSE63941 ZNF654 55279 241348_at -1.1614 0.0539
GSE77861 ZNF654 55279 241348_at -0.7149 0.0133
GSE97050 ZNF654 55279 A_33_P3268124 -0.4287 0.1417
SRP007169 ZNF654 55279 RNAseq -1.3172 0.0000
SRP008496 ZNF654 55279 RNAseq -1.2952 0.0000
SRP064894 ZNF654 55279 RNAseq -0.8631 0.0053
SRP133303 ZNF654 55279 RNAseq 0.1163 0.7130
SRP159526 ZNF654 55279 RNAseq -0.6971 0.1082
SRP193095 ZNF654 55279 RNAseq -0.9626 0.0000
SRP219564 ZNF654 55279 RNAseq -1.0381 0.0233
TCGA ZNF654 55279 RNAseq -0.2364 0.0002

Upregulated datasets: 0; Downregulated datasets: 4.  


 

Survival by ZNF654 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZNF654:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF654 55279 3 15 12
GSE20123 ZNF654 55279 3 16 11
GSE43470 ZNF654 55279 4 19 20
GSE46452 ZNF654 55279 3 16 40
GSE47630 ZNF654 55279 4 18 18
GSE54993 ZNF654 55279 4 3 63
GSE54994 ZNF654 55279 3 27 23
GSE60625 ZNF654 55279 0 6 5
GSE74703 ZNF654 55279 4 17 15
GSE74704 ZNF654 55279 2 11 7
TCGA ZNF654 55279 3 70 23

Total number of gains: 33; Total number of losses: 218; Total Number of normals: 237.  


 

Somatic mutations of ZNF654:

 

Generating mutation plots.

 

Highly correlated genes for ZNF654:

 

Showing top 20/1128 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF654HDHD20.805257404
ZNF654TBRG10.805118303
ZNF654PFKFB20.793608303
ZNF654ZNF7170.764335403
ZNF654CCNYL10.747319404
ZNF654RBM8A0.733357505
ZNF654C5orf510.733265303
ZNF654SLC22A150.729154303
ZNF654MAP3K10.728974706
ZNF654C6orf620.727411504
ZNF654BTBD70.726283403
ZNF654NFIA0.725083504
ZNF654EXOC80.725023404
ZNF654CA130.720421303
ZNF654C3orf380.720007909
ZNF654FAM122A0.716873303
ZNF654COMMD90.714612403
ZNF654UBE2V20.713983403
ZNF654BAZ2B0.710424808
ZNF654TRIM60.708769606

For details and further investigation, click here