| Full name: chromosome 6 open reading frame 62 | Alias Symbol: FLJ12619|DKFZP564G182|XTP12 | ||
| Type: protein-coding gene | Cytoband: 6p22.3 | ||
| Entrez ID: 81688 | HGNC ID: HGNC:20998 | Ensembl Gene: ENSG00000112308 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C6orf62:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C6orf62 | 81688 | 208809_s_at | 0.7234 | 0.1590 | |
| GSE20347 | C6orf62 | 81688 | 208809_s_at | -0.0352 | 0.8329 | |
| GSE23400 | C6orf62 | 81688 | 208809_s_at | 0.2183 | 0.0121 | |
| GSE26886 | C6orf62 | 81688 | 208809_s_at | -1.2445 | 0.0001 | |
| GSE29001 | C6orf62 | 81688 | 208809_s_at | 0.1322 | 0.7215 | |
| GSE38129 | C6orf62 | 81688 | 208809_s_at | 0.0597 | 0.6102 | |
| GSE45670 | C6orf62 | 81688 | 208809_s_at | 0.4452 | 0.0035 | |
| GSE53622 | C6orf62 | 81688 | 54412 | -0.1266 | 0.1039 | |
| GSE53624 | C6orf62 | 81688 | 54412 | -0.1440 | 0.0717 | |
| GSE63941 | C6orf62 | 81688 | 208809_s_at | -0.7507 | 0.0238 | |
| GSE77861 | C6orf62 | 81688 | 208809_s_at | -0.3396 | 0.1693 | |
| GSE97050 | C6orf62 | 81688 | A_23_P42514 | 0.0458 | 0.9153 | |
| SRP007169 | C6orf62 | 81688 | RNAseq | -0.8959 | 0.0027 | |
| SRP008496 | C6orf62 | 81688 | RNAseq | -0.8180 | 0.0000 | |
| SRP064894 | C6orf62 | 81688 | RNAseq | 0.4978 | 0.0117 | |
| SRP133303 | C6orf62 | 81688 | RNAseq | 0.3550 | 0.0098 | |
| SRP159526 | C6orf62 | 81688 | RNAseq | -0.0948 | 0.7128 | |
| SRP193095 | C6orf62 | 81688 | RNAseq | -0.2716 | 0.0024 | |
| SRP219564 | C6orf62 | 81688 | RNAseq | 0.2362 | 0.5321 | |
| TCGA | C6orf62 | 81688 | RNAseq | -0.0253 | 0.6174 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by C6orf62 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C6orf62:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C6orf62 | 81688 | 4 | 2 | 24 | |
| GSE20123 | C6orf62 | 81688 | 4 | 2 | 24 | |
| GSE43470 | C6orf62 | 81688 | 5 | 0 | 38 | |
| GSE46452 | C6orf62 | 81688 | 1 | 9 | 49 | |
| GSE47630 | C6orf62 | 81688 | 8 | 5 | 27 | |
| GSE54993 | C6orf62 | 81688 | 1 | 1 | 68 | |
| GSE54994 | C6orf62 | 81688 | 10 | 4 | 39 | |
| GSE60625 | C6orf62 | 81688 | 0 | 1 | 10 | |
| GSE74703 | C6orf62 | 81688 | 5 | 0 | 31 | |
| GSE74704 | C6orf62 | 81688 | 1 | 1 | 18 | |
| TCGA | C6orf62 | 81688 | 16 | 20 | 60 |
Total number of gains: 55; Total number of losses: 45; Total Number of normals: 388.
Somatic mutations of C6orf62:
Generating mutation plots.
Highly correlated genes for C6orf62:
Showing top 20/562 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C6orf62 | PARP14 | 0.814867 | 3 | 0 | 3 |
| C6orf62 | ZNF441 | 0.810114 | 3 | 0 | 3 |
| C6orf62 | POLR2B | 0.807419 | 3 | 0 | 3 |
| C6orf62 | ZNF92 | 0.781047 | 4 | 0 | 4 |
| C6orf62 | DYNC1I2 | 0.778782 | 3 | 0 | 3 |
| C6orf62 | RBM5 | 0.775277 | 3 | 0 | 3 |
| C6orf62 | AMZ2 | 0.773296 | 3 | 0 | 3 |
| C6orf62 | SRP9 | 0.762587 | 4 | 0 | 4 |
| C6orf62 | PPP1R3D | 0.761068 | 3 | 0 | 3 |
| C6orf62 | MAP3K1 | 0.7569 | 4 | 0 | 3 |
| C6orf62 | TPD52L2 | 0.753314 | 3 | 0 | 3 |
| C6orf62 | ZNF607 | 0.753143 | 3 | 0 | 3 |
| C6orf62 | B3GNT2 | 0.750149 | 3 | 0 | 3 |
| C6orf62 | WWP1 | 0.744805 | 4 | 0 | 4 |
| C6orf62 | PBRM1 | 0.740062 | 4 | 0 | 4 |
| C6orf62 | USP6NL | 0.738842 | 3 | 0 | 3 |
| C6orf62 | ARPC1A | 0.738743 | 3 | 0 | 3 |
| C6orf62 | RASSF5 | 0.732204 | 3 | 0 | 3 |
| C6orf62 | RALGPS2 | 0.731071 | 4 | 0 | 3 |
| C6orf62 | FAM126B | 0.730419 | 4 | 0 | 4 |
For details and further investigation, click here
