| Full name: BRISC and BRCA1 A complex member 1 | Alias Symbol: FLJ20571|HSPC142|NBA1|MERIT40 | ||
| Type: protein-coding gene | Cytoband: 19p13.11 | ||
| Entrez ID: 29086 | HGNC ID: HGNC:25008 | Ensembl Gene: ENSG00000105393 | OMIM ID: 612766 |
Screen Evidence:
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Expression of BABAM1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | BABAM1 | 29086 | 221711_s_at | 0.2615 | 0.6151 | |
| GSE20347 | BABAM1 | 29086 | 221711_s_at | 0.0923 | 0.5054 | |
| GSE23400 | BABAM1 | 29086 | 221711_s_at | 0.1988 | 0.0003 | |
| GSE26886 | BABAM1 | 29086 | 221711_s_at | -0.1063 | 0.6405 | |
| GSE29001 | BABAM1 | 29086 | 221711_s_at | 0.3260 | 0.3232 | |
| GSE38129 | BABAM1 | 29086 | 221711_s_at | 0.1222 | 0.3399 | |
| GSE45670 | BABAM1 | 29086 | 221711_s_at | 0.2118 | 0.0773 | |
| GSE53622 | BABAM1 | 29086 | 6558 | -0.0189 | 0.8413 | |
| GSE53624 | BABAM1 | 29086 | 6558 | 0.2686 | 0.0000 | |
| GSE63941 | BABAM1 | 29086 | 221711_s_at | 0.2780 | 0.4514 | |
| GSE77861 | BABAM1 | 29086 | 221711_s_at | 0.2965 | 0.1039 | |
| GSE97050 | BABAM1 | 29086 | A_23_P119714 | -0.1561 | 0.6270 | |
| SRP007169 | BABAM1 | 29086 | RNAseq | 0.0227 | 0.9539 | |
| SRP008496 | BABAM1 | 29086 | RNAseq | 0.1950 | 0.4389 | |
| SRP064894 | BABAM1 | 29086 | RNAseq | 0.4630 | 0.0943 | |
| SRP133303 | BABAM1 | 29086 | RNAseq | 0.2115 | 0.1098 | |
| SRP159526 | BABAM1 | 29086 | RNAseq | 0.0333 | 0.8773 | |
| SRP193095 | BABAM1 | 29086 | RNAseq | 0.1035 | 0.2480 | |
| SRP219564 | BABAM1 | 29086 | RNAseq | 0.2938 | 0.3747 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by BABAM1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of BABAM1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | BABAM1 | 29086 | 4 | 4 | 22 | |
| GSE20123 | BABAM1 | 29086 | 3 | 2 | 25 | |
| GSE43470 | BABAM1 | 29086 | 2 | 6 | 35 | |
| GSE46452 | BABAM1 | 29086 | 47 | 1 | 11 | |
| GSE47630 | BABAM1 | 29086 | 4 | 8 | 28 | |
| GSE54993 | BABAM1 | 29086 | 15 | 4 | 51 | |
| GSE54994 | BABAM1 | 29086 | 6 | 14 | 33 | |
| GSE60625 | BABAM1 | 29086 | 9 | 0 | 2 | |
| GSE74703 | BABAM1 | 29086 | 2 | 4 | 30 | |
| GSE74704 | BABAM1 | 29086 | 0 | 2 | 18 | |
| TCGA | BABAM1 | 29086 | 17 | 9 | 70 |
Total number of gains: 109; Total number of losses: 54; Total Number of normals: 325.
Somatic mutations of BABAM1:
Generating mutation plots.
Highly correlated genes for BABAM1:
Showing top 20/1016 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| BABAM1 | EXOC6 | 0.816668 | 3 | 0 | 3 |
| BABAM1 | TNFRSF1A | 0.797778 | 3 | 0 | 3 |
| BABAM1 | CD99L2 | 0.780095 | 3 | 0 | 3 |
| BABAM1 | MKNK1 | 0.774984 | 3 | 0 | 3 |
| BABAM1 | KRTCAP2 | 0.764617 | 3 | 0 | 3 |
| BABAM1 | ATG4C | 0.760529 | 3 | 0 | 3 |
| BABAM1 | ASH2L | 0.751948 | 3 | 0 | 3 |
| BABAM1 | RUNDC1 | 0.75014 | 4 | 0 | 4 |
| BABAM1 | UPF3B | 0.742652 | 3 | 0 | 3 |
| BABAM1 | PPP1R35 | 0.741785 | 3 | 0 | 3 |
| BABAM1 | CSRNP2 | 0.739008 | 3 | 0 | 3 |
| BABAM1 | C11orf49 | 0.729965 | 3 | 0 | 3 |
| BABAM1 | B9D2 | 0.726787 | 4 | 0 | 4 |
| BABAM1 | DHX40 | 0.717817 | 4 | 0 | 4 |
| BABAM1 | NDUFA8 | 0.717362 | 3 | 0 | 3 |
| BABAM1 | PRPSAP2 | 0.714769 | 3 | 0 | 3 |
| BABAM1 | PLEKHJ1 | 0.714037 | 3 | 0 | 3 |
| BABAM1 | PELI2 | 0.713539 | 3 | 0 | 3 |
| BABAM1 | ZNF700 | 0.712479 | 3 | 0 | 3 |
| BABAM1 | KTI12 | 0.712302 | 3 | 0 | 3 |
For details and further investigation, click here
