| Full name: BIN3 intronic transcript 1 | Alias Symbol: FLJ14107 | ||
| Type: non-coding RNA | Cytoband: 8p21.3 | ||
| Entrez ID: 80094 | HGNC ID: HGNC:25868 | Ensembl Gene: | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of BIN3-IT1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | BIN3-IT1 | 80094 | 207287_at | 0.1380 | 0.7646 | |
| GSE20347 | BIN3-IT1 | 80094 | 207287_at | 0.1360 | 0.2060 | |
| GSE23400 | BIN3-IT1 | 80094 | 207287_at | -0.0852 | 0.0251 | |
| GSE26886 | BIN3-IT1 | 80094 | 207287_at | 0.0751 | 0.6926 | |
| GSE29001 | BIN3-IT1 | 80094 | 207287_at | -0.0361 | 0.8914 | |
| GSE38129 | BIN3-IT1 | 80094 | 207287_at | 0.0310 | 0.8259 | |
| GSE45670 | BIN3-IT1 | 80094 | 207287_at | 0.0446 | 0.7102 | |
| GSE63941 | BIN3-IT1 | 80094 | 207287_at | 0.1617 | 0.4397 | |
| GSE77861 | BIN3-IT1 | 80094 | 207287_at | -0.0001 | 0.9990 | |
| SRP133303 | BIN3-IT1 | 80094 | RNAseq | -0.0723 | 0.7463 | |
| SRP193095 | BIN3-IT1 | 80094 | RNAseq | -0.1731 | 0.3041 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of BIN3-IT1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | BIN3-IT1 | 80094 | 4 | 10 | 16 | |
| GSE20123 | BIN3-IT1 | 80094 | 4 | 10 | 16 | |
| GSE43470 | BIN3-IT1 | 80094 | 4 | 9 | 30 | |
| GSE46452 | BIN3-IT1 | 80094 | 13 | 13 | 33 | |
| GSE47630 | BIN3-IT1 | 80094 | 10 | 8 | 22 | |
| GSE54993 | BIN3-IT1 | 80094 | 2 | 14 | 54 | |
| GSE54994 | BIN3-IT1 | 80094 | 10 | 17 | 26 | |
| GSE60625 | BIN3-IT1 | 80094 | 3 | 0 | 8 | |
| GSE74703 | BIN3-IT1 | 80094 | 4 | 7 | 25 | |
| GSE74704 | BIN3-IT1 | 80094 | 3 | 7 | 10 |
Total number of gains: 57; Total number of losses: 95; Total Number of normals: 240.
Somatic mutations of BIN3-IT1:
Generating mutation plots.
Highly correlated genes for BIN3-IT1:
Showing top 20/96 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| BIN3-IT1 | TAOK1 | 0.693515 | 3 | 0 | 3 |
| BIN3-IT1 | JRK | 0.674485 | 3 | 0 | 3 |
| BIN3-IT1 | UBQLN4 | 0.654154 | 3 | 0 | 3 |
| BIN3-IT1 | DIP2A | 0.650913 | 5 | 0 | 5 |
| BIN3-IT1 | ALPK1 | 0.650024 | 3 | 0 | 3 |
| BIN3-IT1 | TAF1D | 0.649168 | 3 | 0 | 3 |
| BIN3-IT1 | OPHN1 | 0.647861 | 3 | 0 | 3 |
| BIN3-IT1 | TRAPPC10 | 0.637102 | 3 | 0 | 3 |
| BIN3-IT1 | PODNL1 | 0.636672 | 5 | 0 | 4 |
| BIN3-IT1 | FBXW12 | 0.634362 | 5 | 0 | 5 |
| BIN3-IT1 | IL11 | 0.632492 | 5 | 0 | 5 |
| BIN3-IT1 | FCF1 | 0.621977 | 3 | 0 | 3 |
| BIN3-IT1 | ZC3H7B | 0.621393 | 4 | 0 | 3 |
| BIN3-IT1 | TSR1 | 0.619991 | 4 | 0 | 3 |
| BIN3-IT1 | MAFK | 0.614183 | 3 | 0 | 3 |
| BIN3-IT1 | SLC25A16 | 0.610848 | 5 | 0 | 4 |
| BIN3-IT1 | ZNF721 | 0.608791 | 5 | 0 | 4 |
| BIN3-IT1 | PTCH2 | 0.607673 | 3 | 0 | 3 |
| BIN3-IT1 | IGH | 0.607415 | 3 | 0 | 3 |
| BIN3-IT1 | HAUS2 | 0.606893 | 5 | 0 | 4 |
For details and further investigation, click here
