C16orf46

 

Full name: chromosome 16 open reading frame 46 Alias Symbol: FLJ32702
Type: protein-coding gene Cytoband: 16q23.2
Entrez ID: 123775 HGNC ID: HGNC:26525 Ensembl Gene: ENSG00000166455 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C16orf46:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C16orf46 123775 230281_at 0.2387 0.6036
GSE26886 C16orf46 123775 230281_at 0.3873 0.1362
GSE45670 C16orf46 123775 230281_at 0.1946 0.2878
GSE53622 C16orf46 123775 25137 0.2878 0.0308
GSE53624 C16orf46 123775 25137 0.0866 0.4565
GSE63941 C16orf46 123775 230281_at -0.0975 0.8608
GSE77861 C16orf46 123775 1553303_at -0.1740 0.2413
GSE97050 C16orf46 123775 A_23_P410700 0.2325 0.3156
SRP064894 C16orf46 123775 RNAseq 0.2481 0.1504
SRP133303 C16orf46 123775 RNAseq 0.6762 0.0097
SRP159526 C16orf46 123775 RNAseq 0.5311 0.1775
SRP219564 C16orf46 123775 RNAseq 0.5539 0.1649
TCGA C16orf46 123775 RNAseq 0.1431 0.2716

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by C16orf46 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C16orf46:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C16orf46 123775 5 2 23
GSE20123 C16orf46 123775 5 2 23
GSE43470 C16orf46 123775 2 8 33
GSE46452 C16orf46 123775 37 2 20
GSE47630 C16orf46 123775 11 8 21
GSE54993 C16orf46 123775 2 4 64
GSE54994 C16orf46 123775 7 10 36
GSE60625 C16orf46 123775 4 0 7
GSE74703 C16orf46 123775 2 6 28
GSE74704 C16orf46 123775 3 2 15
TCGA C16orf46 123775 24 16 56

Total number of gains: 102; Total number of losses: 60; Total Number of normals: 326.  


 

Somatic mutations of C16orf46:

 

Generating mutation plots.

 

Highly correlated genes for C16orf46:

 

Showing top 20/104 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C16orf46ZNF5780.83619303
C16orf46GYG20.770823303
C16orf46MON1A0.755592303
C16orf46LSP10.751404303
C16orf46NOL90.743644303
C16orf46DOCK70.733098303
C16orf46ZDHHC160.731677303
C16orf46SLC25A400.730714303
C16orf46SNRPN0.719813303
C16orf46GSK3B0.712406303
C16orf46MPHOSPH90.711336303
C16orf46PARK70.711182303
C16orf46DIDO10.710541303
C16orf46TASP10.706924303
C16orf46KIF240.700966303
C16orf46GLYR10.699883303
C16orf46FLYWCH20.6992303
C16orf46ORC50.693616303
C16orf46TMEM690.692676303
C16orf46ZXDB0.692486303

For details and further investigation, click here