PARK7

 

Full name: Parkinsonism associated deglycase Alias Symbol: DJ-1|DJ1|GATD2
Type: protein-coding gene Cytoband: 1p36.23
Entrez ID: 11315 HGNC ID: HGNC:16369 Ensembl Gene: ENSG00000116288 OMIM ID: 602533
Drug and gene relationship at DGIdb

 

Expression of PARK7:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PARK7 11315 200006_at 0.2207 0.6084
GSE20347 PARK7 11315 200006_at 0.2688 0.0369
GSE23400 PARK7 11315 200006_at 0.4399 0.0000
GSE26886 PARK7 11315 200006_at 0.3592 0.0454
GSE29001 PARK7 11315 200006_at 0.4297 0.0419
GSE38129 PARK7 11315 200006_at 0.1980 0.1531
GSE45670 PARK7 11315 200006_at 0.1571 0.3416
GSE53622 PARK7 11315 69559 0.2195 0.0003
GSE53624 PARK7 11315 69559 0.5586 0.0000
GSE63941 PARK7 11315 200006_at -0.0848 0.8068
GSE77861 PARK7 11315 200006_at 0.1867 0.2054
GSE97050 PARK7 11315 A_33_P3231981 0.1292 0.6810
SRP007169 PARK7 11315 RNAseq 1.1265 0.0183
SRP008496 PARK7 11315 RNAseq 0.9288 0.0097
SRP064894 PARK7 11315 RNAseq 0.6189 0.0249
SRP133303 PARK7 11315 RNAseq 0.5237 0.0004
SRP159526 PARK7 11315 RNAseq 0.2730 0.1766
SRP193095 PARK7 11315 RNAseq 0.1262 0.2844
SRP219564 PARK7 11315 RNAseq 0.1533 0.7397
TCGA PARK7 11315 RNAseq -0.0207 0.6474

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by PARK7 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PARK7:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PARK7 11315 1 5 24
GSE20123 PARK7 11315 1 3 26
GSE43470 PARK7 11315 6 5 32
GSE46452 PARK7 11315 7 1 51
GSE47630 PARK7 11315 8 4 28
GSE54993 PARK7 11315 3 2 65
GSE54994 PARK7 11315 14 3 36
GSE60625 PARK7 11315 0 0 11
GSE74703 PARK7 11315 5 3 28
GSE74704 PARK7 11315 1 0 19
TCGA PARK7 11315 11 23 62

Total number of gains: 57; Total number of losses: 49; Total Number of normals: 382.  


 

Somatic mutations of PARK7:

 

Generating mutation plots.

 

Highly correlated genes for PARK7:

 

Showing top 20/1398 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PARK7SBNO10.851427303
PARK7TMEM2050.824423303
PARK7IFT800.780073303
PARK7ASH2L0.778688404
PARK7ANKIB10.77346303
PARK7RAVER10.770583303
PARK7STX100.758051303
PARK7NAPB0.738016303
PARK7LMBR10.732683303
PARK7NOM10.730597303
PARK7PSMC10.729461303
PARK7KRTCAP20.724604303
PARK7MED260.724116303
PARK7RBM260.722002303
PARK7DNAJC190.716131303
PARK7RAB340.715045303
PARK7KDM4A0.712705303
PARK7C16orf460.711182303
PARK7PACS10.710674303
PARK7EBNA1BP20.710527303

For details and further investigation, click here