ZNF578

 

Full name: zinc finger protein 578 Alias Symbol: FLJ31384
Type: protein-coding gene Cytoband: 19q13.41
Entrez ID: 147660 HGNC ID: HGNC:26449 Ensembl Gene: ENSG00000258405 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ZNF578:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF578 147660 1562244_at 0.6680 0.6397
GSE26886 ZNF578 147660 1562244_at -0.0386 0.6977
GSE45670 ZNF578 147660 1562244_at -0.1503 0.1045
GSE63941 ZNF578 147660 1562244_at -2.1581 0.0007
GSE77861 ZNF578 147660 1562244_at -0.1243 0.2456
GSE97050 ZNF578 147660 A_33_P3345132 -0.2657 0.4609
SRP007169 ZNF578 147660 RNAseq -0.1770 0.7156
SRP064894 ZNF578 147660 RNAseq 0.1377 0.5797
SRP133303 ZNF578 147660 RNAseq -0.0552 0.7781
SRP159526 ZNF578 147660 RNAseq -0.5382 0.2826
SRP193095 ZNF578 147660 RNAseq -0.0784 0.5921
SRP219564 ZNF578 147660 RNAseq 0.2717 0.4764
TCGA ZNF578 147660 RNAseq -1.0229 0.0046

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by ZNF578 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of ZNF578:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF578 147660 3 5 22
GSE20123 ZNF578 147660 3 4 23
GSE43470 ZNF578 147660 2 11 30
GSE46452 ZNF578 147660 45 1 13
GSE47630 ZNF578 147660 9 6 25
GSE54993 ZNF578 147660 17 4 49
GSE54994 ZNF578 147660 4 14 35
GSE60625 ZNF578 147660 9 0 2
GSE74703 ZNF578 147660 2 7 27
GSE74704 ZNF578 147660 3 2 15
TCGA ZNF578 147660 15 20 61

Total number of gains: 112; Total number of losses: 74; Total Number of normals: 302.  


 

Somatic mutations of ZNF578:

 

Generating mutation plots.

 

Highly correlated genes for ZNF578:

 

Showing top 20/175 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF578C16orf460.83619303
ZNF578GYG20.827876303
ZNF578IP6K10.823752303
ZNF578SON0.815788303
ZNF578PDE5A0.813858303
ZNF578ZNF3220.80978303
ZNF578SCAF80.80899303
ZNF578ZNF5060.803494303
ZNF578RABEP20.795021404
ZNF578CASP90.794519303
ZNF578RRAGB0.791067303
ZNF578TSPAN50.787074303
ZNF578ZNF3470.786155303
ZNF578APBB1IP0.784383303
ZNF578ZBTB20.780409303
ZNF578ZNF518A0.776335303
ZNF578OTUD7B0.775255303
ZNF578CCNB30.771014303
ZNF578LRRC340.770656303
ZNF578BET10.76985303

For details and further investigation, click here