C1orf216

 

Full name: chromosome 1 open reading frame 216 Alias Symbol: FLJ38984
Type: protein-coding gene Cytoband: 1p34.3
Entrez ID: 127703 HGNC ID: HGNC:26800 Ensembl Gene: ENSG00000142686 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C1orf216:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C1orf216 127703 212791_at 0.3617 0.5857
GSE20347 C1orf216 127703 212791_at 0.6808 0.0001
GSE23400 C1orf216 127703 212791_at 0.2855 0.0000
GSE26886 C1orf216 127703 212791_at 1.5022 0.0000
GSE29001 C1orf216 127703 212791_at 1.0800 0.0001
GSE38129 C1orf216 127703 212791_at 0.3801 0.1542
GSE45670 C1orf216 127703 212791_at 0.3046 0.3193
GSE53622 C1orf216 127703 110250 0.5203 0.0006
GSE53624 C1orf216 127703 110250 1.0655 0.0000
GSE63941 C1orf216 127703 212791_at -2.2676 0.0007
GSE77861 C1orf216 127703 212791_at 0.8854 0.0007
GSE97050 C1orf216 127703 A_23_P321377 -0.0294 0.9380
SRP007169 C1orf216 127703 RNAseq 2.8241 0.0020
SRP064894 C1orf216 127703 RNAseq 1.3362 0.0000
SRP133303 C1orf216 127703 RNAseq 0.7524 0.0026
SRP159526 C1orf216 127703 RNAseq 1.0684 0.0000
SRP193095 C1orf216 127703 RNAseq 1.6036 0.0000
SRP219564 C1orf216 127703 RNAseq 0.2558 0.6571
TCGA C1orf216 127703 RNAseq 0.0775 0.2737

Upregulated datasets: 7; Downregulated datasets: 1.  


 

Survival by C1orf216 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C1orf216:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C1orf216 127703 2 5 23
GSE20123 C1orf216 127703 2 4 24
GSE43470 C1orf216 127703 7 2 34
GSE46452 C1orf216 127703 4 1 54
GSE47630 C1orf216 127703 8 3 29
GSE54993 C1orf216 127703 1 1 68
GSE54994 C1orf216 127703 11 2 40
GSE60625 C1orf216 127703 0 0 11
GSE74703 C1orf216 127703 6 1 29
GSE74704 C1orf216 127703 1 0 19
TCGA C1orf216 127703 11 19 66

Total number of gains: 53; Total number of losses: 38; Total Number of normals: 397.  


 

Somatic mutations of C1orf216:

 

Generating mutation plots.

 

Highly correlated genes for C1orf216:

 

Showing top 20/1689 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C1orf216PLEKHM30.81535303
C1orf216NACC10.778939303
C1orf216ALKBH60.778744403
C1orf216WDR810.773841403
C1orf216DNPEP0.770399404
C1orf216DDX540.769711303
C1orf216CD440.766163404
C1orf216MAN1C10.765805303
C1orf216MB21D20.761495505
C1orf216TTC7B0.757155707
C1orf216RAB340.755598303
C1orf216RILPL10.75335404
C1orf216DEDD20.75256303
C1orf216JMY0.751432303
C1orf216TMEM2630.750589707
C1orf216CHST150.74612311011
C1orf216SETBP10.745034303
C1orf216TTYH20.743965606
C1orf216GFRA10.743805303
C1orf216LHFPL20.74267312012

For details and further investigation, click here