C8orf37

 

Full name: chromosome 8 open reading frame 37 Alias Symbol: FLJ30600|CORD16|RP64|BBS21
Type: protein-coding gene Cytoband: 8q22.1
Entrez ID: 157657 HGNC ID: HGNC:27232 Ensembl Gene: ENSG00000156172 OMIM ID: 614477
Drug and gene relationship at DGIdb

 

Expression of C8orf37:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C8orf37 157657 244569_at 0.1186 0.8631
GSE26886 C8orf37 157657 244569_at 0.3937 0.0166
GSE45670 C8orf37 157657 244569_at -0.0174 0.9501
GSE53622 C8orf37 157657 9477 0.1735 0.0482
GSE53624 C8orf37 157657 9477 0.1977 0.0180
GSE63941 C8orf37 157657 244569_at 1.3125 0.0253
GSE77861 C8orf37 157657 244569_at -0.0514 0.7068
GSE97050 C8orf37 157657 A_33_P3293207 -0.3139 0.2330
SRP007169 C8orf37 157657 RNAseq 0.0522 0.9148
SRP008496 C8orf37 157657 RNAseq 0.2855 0.3901
SRP133303 C8orf37 157657 RNAseq 0.2850 0.0672
SRP159526 C8orf37 157657 RNAseq 0.2254 0.4944
SRP193095 C8orf37 157657 RNAseq 0.1492 0.2551
SRP219564 C8orf37 157657 RNAseq 0.5597 0.1296
TCGA C8orf37 157657 RNAseq 0.3359 0.0010

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by C8orf37 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C8orf37:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C8orf37 157657 16 0 14
GSE20123 C8orf37 157657 17 0 13
GSE43470 C8orf37 157657 21 1 21
GSE46452 C8orf37 157657 23 0 36
GSE47630 C8orf37 157657 24 0 16
GSE54993 C8orf37 157657 0 20 50
GSE54994 C8orf37 157657 34 1 18
GSE60625 C8orf37 157657 0 4 7
GSE74703 C8orf37 157657 18 1 17
GSE74704 C8orf37 157657 12 0 8
TCGA C8orf37 157657 56 1 39

Total number of gains: 221; Total number of losses: 28; Total Number of normals: 239.  


 

Somatic mutations of C8orf37:

 

Generating mutation plots.

 

Highly correlated genes for C8orf37:

 

Showing top 20/91 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C8orf37BIRC30.818526303
C8orf37ZNF6520.743436303
C8orf37NFIB0.742942303
C8orf37NIT10.737471303
C8orf37DDX19A0.729682303
C8orf37DTWD20.725234303
C8orf37FBXO210.724314303
C8orf37SLC35E10.72291303
C8orf37LCAT0.711527303
C8orf37METTL150.711055303
C8orf37RPUSD30.70293303
C8orf37GDAP10.700905303
C8orf37C12orf450.6992303
C8orf37SIX50.698933303
C8orf37ATG100.698677403
C8orf37VAMP20.694407303
C8orf37MB21D20.692383303
C8orf37MPV17L0.688583303
C8orf37SPG70.688215303
C8orf37HFE0.686954303

For details and further investigation, click here