CAP1

 

Full name: cyclase associated actin cytoskeleton regulatory protein 1 Alias Symbol: CAP
Type: protein-coding gene Cytoband: 1p34.2
Entrez ID: 10487 HGNC ID: HGNC:20040 Ensembl Gene: ENSG00000131236 OMIM ID: 617801
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of CAP1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CAP1 10487 200625_s_at -0.0305 0.9518
GSE20347 CAP1 10487 200625_s_at -0.2341 0.0720
GSE23400 CAP1 10487 200625_s_at 0.1727 0.0304
GSE26886 CAP1 10487 200625_s_at -0.0517 0.8400
GSE29001 CAP1 10487 213798_s_at -0.0950 0.6974
GSE38129 CAP1 10487 200625_s_at -0.2019 0.1046
GSE45670 CAP1 10487 200625_s_at 0.2234 0.1971
GSE53622 CAP1 10487 50668 -0.1400 0.0559
GSE53624 CAP1 10487 117583 0.1910 0.0018
GSE63941 CAP1 10487 213798_s_at -1.1144 0.0546
GSE77861 CAP1 10487 200625_s_at 0.2649 0.3702
GSE97050 CAP1 10487 A_33_P3281816 0.0176 0.9497
SRP007169 CAP1 10487 RNAseq -0.5677 0.1327
SRP008496 CAP1 10487 RNAseq -0.6099 0.0085
SRP064894 CAP1 10487 RNAseq -0.1772 0.5732
SRP133303 CAP1 10487 RNAseq 0.4034 0.0795
SRP159526 CAP1 10487 RNAseq 0.6398 0.3760
SRP193095 CAP1 10487 RNAseq -0.0506 0.7284
SRP219564 CAP1 10487 RNAseq 0.0472 0.9323
TCGA CAP1 10487 RNAseq 0.0901 0.1241

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CAP1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CAP1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CAP1 10487 3 4 23
GSE20123 CAP1 10487 2 3 25
GSE43470 CAP1 10487 7 2 34
GSE46452 CAP1 10487 4 1 54
GSE47630 CAP1 10487 9 2 29
GSE54993 CAP1 10487 0 1 69
GSE54994 CAP1 10487 13 2 38
GSE60625 CAP1 10487 0 0 11
GSE74703 CAP1 10487 6 1 29
GSE74704 CAP1 10487 1 0 19
TCGA CAP1 10487 16 16 64

Total number of gains: 61; Total number of losses: 32; Total Number of normals: 395.  


 

Somatic mutations of CAP1:

 

Generating mutation plots.

 

Highly correlated genes for CAP1:

 

Showing top 20/247 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CAP1OTUD7B0.76038303
CAP1TTC370.739336303
CAP1AGBL50.71321303
CAP1SLC37A30.690847303
CAP1BOD10.685293303
CAP1BUD310.669277303
CAP1IPO70.668103303
CAP1STX100.660582303
CAP1AKIRIN10.659356707
CAP1ZNF7460.651353303
CAP1TPRG1L0.650567303
CAP1HSPA90.642563303
CAP1FKBP30.634798403
CAP1CCNY0.63474303
CAP1SLC2A30.631283303
CAP1MFF0.630059403
CAP1UBE2H0.62546403
CAP1TRIM230.625209303
CAP1ZNF5780.625038303
CAP1C1orf1220.62323705

For details and further investigation, click here