| Full name: cancer susceptibility 17 | Alias Symbol: LINC00600 | ||
| Type: non-coding RNA | Cytoband: 17q24.3 | ||
| Entrez ID: 101928165 | HGNC ID: HGNC:43911 | Ensembl Gene: ENSG00000260785 | OMIM ID: |
Expression of CASC17:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CASC17 | 101928165 | 1557875_at | 0.0085 | 0.9816 | |
| GSE26886 | CASC17 | 101928165 | 1557875_at | -0.0331 | 0.7744 | |
| GSE45670 | CASC17 | 101928165 | 1557875_at | 0.0428 | 0.6999 | |
| GSE63941 | CASC17 | 101928165 | 1557875_at | -0.0030 | 0.9862 | |
| GSE77861 | CASC17 | 101928165 | 1557875_at | -0.1326 | 0.1242 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of CASC17:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CASC17 | 101928165 | 3 | 1 | 26 | |
| GSE20123 | CASC17 | 101928165 | 3 | 1 | 26 | |
| GSE43470 | CASC17 | 101928165 | 7 | 1 | 35 | |
| GSE46452 | CASC17 | 101928165 | 32 | 0 | 27 | |
| GSE47630 | CASC17 | 101928165 | 7 | 1 | 32 | |
| GSE54993 | CASC17 | 101928165 | 2 | 5 | 63 | |
| GSE54994 | CASC17 | 101928165 | 10 | 4 | 39 | |
| GSE60625 | CASC17 | 101928165 | 4 | 3 | 4 | |
| GSE74703 | CASC17 | 101928165 | 7 | 0 | 29 | |
| GSE74704 | CASC17 | 101928165 | 3 | 1 | 16 |
Total number of gains: 78; Total number of losses: 17; Total Number of normals: 297.
Somatic mutations of CASC17:
Generating mutation plots.
Highly correlated genes for CASC17:
Showing top 20/109 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CASC17 | TPSG1 | 0.69749 | 3 | 0 | 3 |
| CASC17 | IGDCC3 | 0.683296 | 3 | 0 | 3 |
| CASC17 | OR6B1 | 0.676179 | 3 | 0 | 3 |
| CASC17 | ANKRD34A | 0.667754 | 3 | 0 | 3 |
| CASC17 | TTLL6 | 0.659184 | 3 | 0 | 3 |
| CASC17 | GLP1R | 0.658948 | 3 | 0 | 3 |
| CASC17 | C2orf72 | 0.653854 | 4 | 0 | 3 |
| CASC17 | KLF14 | 0.651749 | 5 | 0 | 4 |
| CASC17 | FABP1 | 0.647691 | 3 | 0 | 3 |
| CASC17 | SLC17A1 | 0.6354 | 3 | 0 | 3 |
| CASC17 | SLC28A1 | 0.634306 | 3 | 0 | 3 |
| CASC17 | ACTL7A | 0.631478 | 4 | 0 | 3 |
| CASC17 | MUC3B | 0.626604 | 3 | 0 | 3 |
| CASC17 | LINC01366 | 0.62648 | 3 | 0 | 3 |
| CASC17 | GJB4 | 0.625433 | 4 | 0 | 4 |
| CASC17 | LINC00112 | 0.622534 | 3 | 0 | 3 |
| CASC17 | WDR87 | 0.619927 | 3 | 0 | 3 |
| CASC17 | RNF157 | 0.613327 | 4 | 0 | 3 |
| CASC17 | FGF6 | 0.613083 | 3 | 0 | 3 |
| CASC17 | CACNG6 | 0.611926 | 5 | 0 | 4 |
For details and further investigation, click here
