| Full name: solute carrier family 28 member 1 | Alias Symbol: CNT1 | ||
| Type: protein-coding gene | Cytoband: 15q25.3 | ||
| Entrez ID: 9154 | HGNC ID: HGNC:11001 | Ensembl Gene: ENSG00000156222 | OMIM ID: 606207 |
| Drug and gene relationship at DGIdb | |||
Expression of SLC28A1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SLC28A1 | 9154 | 207560_at | -0.1328 | 0.6684 | |
| GSE20347 | SLC28A1 | 9154 | 207560_at | -0.0181 | 0.8672 | |
| GSE23400 | SLC28A1 | 9154 | 207560_at | -0.1469 | 0.0000 | |
| GSE26886 | SLC28A1 | 9154 | 207560_at | -0.1522 | 0.3613 | |
| GSE29001 | SLC28A1 | 9154 | 207560_at | -0.1953 | 0.1165 | |
| GSE38129 | SLC28A1 | 9154 | 207560_at | -0.1523 | 0.0808 | |
| GSE45670 | SLC28A1 | 9154 | 207560_at | -0.1930 | 0.0975 | |
| GSE53622 | SLC28A1 | 9154 | 85936 | 0.0170 | 0.8422 | |
| GSE53624 | SLC28A1 | 9154 | 85936 | 0.1310 | 0.1131 | |
| GSE63941 | SLC28A1 | 9154 | 207560_at | 0.0872 | 0.6392 | |
| GSE77861 | SLC28A1 | 9154 | 207560_at | -0.0812 | 0.4695 | |
| SRP064894 | SLC28A1 | 9154 | RNAseq | 0.7336 | 0.0112 | |
| SRP133303 | SLC28A1 | 9154 | RNAseq | -0.0217 | 0.9197 | |
| SRP159526 | SLC28A1 | 9154 | RNAseq | -0.0775 | 0.8738 | |
| SRP219564 | SLC28A1 | 9154 | RNAseq | 0.1573 | 0.7914 | |
| TCGA | SLC28A1 | 9154 | RNAseq | 2.1737 | 0.0873 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SLC28A1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SLC28A1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SLC28A1 | 9154 | 8 | 0 | 22 | |
| GSE20123 | SLC28A1 | 9154 | 8 | 0 | 22 | |
| GSE43470 | SLC28A1 | 9154 | 4 | 4 | 35 | |
| GSE46452 | SLC28A1 | 9154 | 3 | 7 | 49 | |
| GSE47630 | SLC28A1 | 9154 | 8 | 10 | 22 | |
| GSE54993 | SLC28A1 | 9154 | 5 | 6 | 59 | |
| GSE54994 | SLC28A1 | 9154 | 6 | 6 | 41 | |
| GSE60625 | SLC28A1 | 9154 | 4 | 0 | 7 | |
| GSE74703 | SLC28A1 | 9154 | 4 | 2 | 30 | |
| GSE74704 | SLC28A1 | 9154 | 4 | 0 | 16 | |
| TCGA | SLC28A1 | 9154 | 16 | 13 | 67 |
Total number of gains: 70; Total number of losses: 48; Total Number of normals: 370.
Somatic mutations of SLC28A1:
Generating mutation plots.
Highly correlated genes for SLC28A1:
Showing top 20/997 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SLC28A1 | AMN | 0.716345 | 5 | 0 | 5 |
| SLC28A1 | CAMK2B | 0.697666 | 6 | 0 | 6 |
| SLC28A1 | FSTL4 | 0.682546 | 5 | 0 | 5 |
| SLC28A1 | CCDC9 | 0.68078 | 4 | 0 | 4 |
| SLC28A1 | CIITA | 0.680618 | 6 | 0 | 5 |
| SLC28A1 | CGA | 0.679412 | 5 | 0 | 4 |
| SLC28A1 | LMAN1L | 0.675676 | 6 | 0 | 6 |
| SLC28A1 | GDF2 | 0.675118 | 5 | 0 | 4 |
| SLC28A1 | FRAS1 | 0.669394 | 4 | 0 | 4 |
| SLC28A1 | DUX1 | 0.664579 | 6 | 0 | 5 |
| SLC28A1 | SHOX | 0.659658 | 4 | 0 | 3 |
| SLC28A1 | HPCA | 0.658231 | 4 | 0 | 4 |
| SLC28A1 | MRPL41 | 0.656774 | 3 | 0 | 3 |
| SLC28A1 | NKAIN1 | 0.656567 | 4 | 0 | 3 |
| SLC28A1 | RHO | 0.654578 | 7 | 0 | 6 |
| SLC28A1 | ATP8B3 | 0.652871 | 3 | 0 | 3 |
| SLC28A1 | PROP1 | 0.652827 | 6 | 0 | 6 |
| SLC28A1 | CRHR2 | 0.652256 | 6 | 0 | 6 |
| SLC28A1 | SPTBN5 | 0.651287 | 3 | 0 | 3 |
| SLC28A1 | SAMD4B | 0.649933 | 3 | 0 | 3 |
For details and further investigation, click here
