| Full name: coiled-coil domain containing 38 | Alias Symbol: FLJ40089 | ||
| Type: protein-coding gene | Cytoband: 12q23.1 | ||
| Entrez ID: 120935 | HGNC ID: HGNC:26843 | Ensembl Gene: ENSG00000165972 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of CCDC38:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CCDC38 | 120935 | 1557620_a_at | 0.1630 | 0.5526 | |
| GSE26886 | CCDC38 | 120935 | 1557620_a_at | 0.1576 | 0.4343 | |
| GSE45670 | CCDC38 | 120935 | 1557620_a_at | 0.2953 | 0.0326 | |
| GSE53622 | CCDC38 | 120935 | 45607 | 0.7708 | 0.0000 | |
| GSE53624 | CCDC38 | 120935 | 45607 | 0.3740 | 0.0090 | |
| GSE63941 | CCDC38 | 120935 | 1557620_a_at | 0.0328 | 0.8903 | |
| GSE77861 | CCDC38 | 120935 | 1557620_a_at | -0.0010 | 0.9958 | |
| GSE97050 | CCDC38 | 120935 | A_32_P54037 | 0.0038 | 0.9868 | |
| SRP133303 | CCDC38 | 120935 | RNAseq | 0.3058 | 0.4456 | |
| TCGA | CCDC38 | 120935 | RNAseq | 3.3307 | 0.0219 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by CCDC38 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CCDC38:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CCDC38 | 120935 | 3 | 1 | 26 | |
| GSE20123 | CCDC38 | 120935 | 3 | 1 | 26 | |
| GSE43470 | CCDC38 | 120935 | 3 | 0 | 40 | |
| GSE46452 | CCDC38 | 120935 | 9 | 1 | 49 | |
| GSE47630 | CCDC38 | 120935 | 9 | 1 | 30 | |
| GSE54993 | CCDC38 | 120935 | 0 | 5 | 65 | |
| GSE54994 | CCDC38 | 120935 | 4 | 1 | 48 | |
| GSE60625 | CCDC38 | 120935 | 0 | 0 | 11 | |
| GSE74703 | CCDC38 | 120935 | 3 | 0 | 33 | |
| GSE74704 | CCDC38 | 120935 | 1 | 1 | 18 | |
| TCGA | CCDC38 | 120935 | 18 | 10 | 68 |
Total number of gains: 53; Total number of losses: 21; Total Number of normals: 414.
Somatic mutations of CCDC38:
Generating mutation plots.
Highly correlated genes for CCDC38:
Showing all 20 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CCDC38 | KIR2DL1 | 0.68106 | 3 | 0 | 3 |
| CCDC38 | FANCC | 0.62455 | 3 | 0 | 3 |
| CCDC38 | TNFSF11 | 0.613691 | 3 | 0 | 3 |
| CCDC38 | C6orf15 | 0.585607 | 4 | 0 | 3 |
| CCDC38 | PWRN2 | 0.581369 | 3 | 0 | 3 |
| CCDC38 | LUZP4 | 0.577636 | 4 | 0 | 3 |
| CCDC38 | KIF5A | 0.568856 | 3 | 0 | 3 |
| CCDC38 | SPDYE5 | 0.558024 | 3 | 0 | 3 |
| CCDC38 | DMRTB1 | 0.550914 | 5 | 0 | 4 |
| CCDC38 | SPSB4 | 0.549546 | 4 | 0 | 3 |
| CCDC38 | GPX2 | 0.546143 | 4 | 0 | 3 |
| CCDC38 | LINC00454 | 0.54339 | 5 | 0 | 5 |
| CCDC38 | MNX1 | 0.536571 | 4 | 0 | 3 |
| CCDC38 | DLX5 | 0.533905 | 5 | 0 | 3 |
| CCDC38 | KRTCAP3 | 0.533807 | 3 | 0 | 3 |
| CCDC38 | NPHP3-AS1 | 0.530918 | 3 | 0 | 3 |
| CCDC38 | MYBPH | 0.530237 | 4 | 0 | 3 |
| CCDC38 | ZNF236 | 0.528474 | 5 | 0 | 3 |
| CCDC38 | TSSK3 | 0.50735 | 5 | 0 | 3 |
| CCDC38 | CEP72 | 0.504247 | 5 | 0 | 3 |
For details and further investigation, click here
