CHODL

 

Full name: chondrolectin Alias Symbol: FLJ12627|PRED12|MT75
Type: protein-coding gene Cytoband: 21q21.1
Entrez ID: 140578 HGNC ID: HGNC:17807 Ensembl Gene: ENSG00000154645 OMIM ID: 607247
Drug and gene relationship at DGIdb

 

Expression of CHODL:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CHODL 140578 219867_at 0.5532 0.3685
GSE20347 CHODL 140578 219867_at 1.1524 0.0001
GSE23400 CHODL 140578 219867_at 0.3064 0.0121
GSE26886 CHODL 140578 219867_at 1.1376 0.0151
GSE29001 CHODL 140578 219867_at 0.8644 0.0421
GSE38129 CHODL 140578 219867_at 0.9574 0.0003
GSE45670 CHODL 140578 219867_at 0.6136 0.3155
GSE53622 CHODL 140578 33628 0.5065 0.0078
GSE53624 CHODL 140578 33628 0.9569 0.0000
GSE63941 CHODL 140578 219867_at 0.8203 0.3544
GSE77861 CHODL 140578 219867_at 0.2520 0.4548
GSE97050 CHODL 140578 A_23_P68669 -0.1390 0.7192
SRP064894 CHODL 140578 RNAseq 1.4958 0.0005
SRP133303 CHODL 140578 RNAseq 0.8322 0.0059
SRP159526 CHODL 140578 RNAseq 2.4665 0.0015
SRP193095 CHODL 140578 RNAseq 1.2505 0.0000
SRP219564 CHODL 140578 RNAseq 0.1976 0.8380
TCGA CHODL 140578 RNAseq 0.7023 0.0551

Upregulated datasets: 5; Downregulated datasets: 0.  

 

Survival by CHODL expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of CHODL:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CHODL 140578 1 13 16
GSE20123 CHODL 140578 1 13 16
GSE43470 CHODL 140578 1 11 31
GSE46452 CHODL 140578 1 22 36
GSE47630 CHODL 140578 6 17 17
GSE54993 CHODL 140578 9 2 59
GSE54994 CHODL 140578 3 10 40
GSE60625 CHODL 140578 0 0 11
GSE74703 CHODL 140578 1 8 27
GSE74704 CHODL 140578 1 9 10
TCGA CHODL 140578 11 43 42

Total number of gains: 35; Total number of losses: 148; Total Number of normals: 305.  

 

Somatic mutations of CHODL:

 

Generating mutation plots.

 

Highly correlated genes for CHODL:

 

Showing top 20/164 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CHODLMAF10.72806303
CHODLLINC002940.686712303
CHODLCCDC1490.683831303
CHODLNAA100.669638303
CHODLFLYWCH10.653603303
CHODLPRKACA0.650231303
CHODLGXYLT20.645383303
CHODLC17orf670.641288303
CHODLMBD30.637816303
CHODLIFITM30.632318403
CHODLGABBR10.630946303
CHODLMTSS10.628991303
CHODLEGFL70.628547303
CHODLCLIP20.619459403
CHODLCDC42EP40.615884403
CHODLSIX50.612654303
CHODLSPSB10.612467503
CHODLSP30.609887504
CHODLIQSEC10.609035303
CHODLPRELID20.606902403

For details and further investigation, click here