| Full name: long intergenic non-protein coding RNA 294 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 11p13 | ||
| Entrez ID: 283267 | HGNC ID: HGNC:27456 | Ensembl Gene: ENSG00000280798 | OMIM ID: 612296 |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00294:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00294 | 283267 | 226793_at | 0.0596 | 0.9389 | |
| GSE26886 | LINC00294 | 283267 | 226793_at | 0.8454 | 0.0063 | |
| GSE45670 | LINC00294 | 283267 | 226793_at | 0.2027 | 0.3193 | |
| GSE63941 | LINC00294 | 283267 | 226793_at | 0.0896 | 0.9213 | |
| GSE77861 | LINC00294 | 283267 | 226793_at | 0.3401 | 0.4710 | |
| SRP007169 | LINC00294 | 283267 | RNAseq | 1.2510 | 0.0304 | |
| SRP008496 | LINC00294 | 283267 | RNAseq | 1.6802 | 0.0002 | |
| SRP064894 | LINC00294 | 283267 | RNAseq | 0.5226 | 0.0020 | |
| SRP133303 | LINC00294 | 283267 | RNAseq | 0.2917 | 0.0858 | |
| SRP159526 | LINC00294 | 283267 | RNAseq | -0.1681 | 0.4794 | |
| SRP193095 | LINC00294 | 283267 | RNAseq | 0.3007 | 0.0154 | |
| SRP219564 | LINC00294 | 283267 | RNAseq | -0.2111 | 0.4928 |
Upregulated datasets: 2; Downregulated datasets: 0.
Copy number change of LINC00294:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00294 | 283267 | 0 | 7 | 23 | |
| GSE20123 | LINC00294 | 283267 | 0 | 6 | 24 | |
| GSE43470 | LINC00294 | 283267 | 2 | 4 | 37 | |
| GSE46452 | LINC00294 | 283267 | 8 | 5 | 46 | |
| GSE47630 | LINC00294 | 283267 | 3 | 10 | 27 | |
| GSE54993 | LINC00294 | 283267 | 3 | 0 | 67 | |
| GSE54994 | LINC00294 | 283267 | 3 | 10 | 40 | |
| GSE60625 | LINC00294 | 283267 | 0 | 0 | 11 | |
| GSE74703 | LINC00294 | 283267 | 2 | 2 | 32 | |
| GSE74704 | LINC00294 | 283267 | 0 | 4 | 16 |
Total number of gains: 21; Total number of losses: 48; Total Number of normals: 323.
Somatic mutations of LINC00294:
Generating mutation plots.
Highly correlated genes for LINC00294:
Showing top 20/60 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00294 | CHST3 | 0.703682 | 4 | 0 | 4 |
| LINC00294 | PRICKLE1 | 0.694983 | 3 | 0 | 3 |
| LINC00294 | CHODL | 0.686712 | 3 | 0 | 3 |
| LINC00294 | ZYX | 0.6825 | 3 | 0 | 3 |
| LINC00294 | FLYWCH1 | 0.651953 | 3 | 0 | 3 |
| LINC00294 | PTPN9 | 0.633716 | 4 | 0 | 3 |
| LINC00294 | BFAR | 0.630316 | 3 | 0 | 3 |
| LINC00294 | KATNAL1 | 0.62428 | 3 | 0 | 3 |
| LINC00294 | ELF4 | 0.62213 | 3 | 0 | 3 |
| LINC00294 | IL15RA | 0.612561 | 4 | 0 | 4 |
| LINC00294 | PIP4K2B | 0.612228 | 3 | 0 | 3 |
| LINC00294 | OLFML2A | 0.60834 | 4 | 0 | 3 |
| LINC00294 | UGGT2 | 0.607198 | 3 | 0 | 3 |
| LINC00294 | PTPN14 | 0.603248 | 5 | 0 | 4 |
| LINC00294 | IFITM3 | 0.603215 | 4 | 0 | 3 |
| LINC00294 | MTCL1 | 0.601972 | 4 | 0 | 4 |
| LINC00294 | SNX27 | 0.601178 | 3 | 0 | 3 |
| LINC00294 | ABL1 | 0.600936 | 4 | 0 | 3 |
| LINC00294 | ITGB4 | 0.599764 | 3 | 0 | 3 |
| LINC00294 | CCDC92 | 0.598437 | 4 | 0 | 3 |
For details and further investigation, click here
