| Full name: cysteine and glycine rich protein 2 | Alias Symbol: SmLIM|CRP2|LMO5 | ||
| Type: protein-coding gene | Cytoband: 12q21.2 | ||
| Entrez ID: 1466 | HGNC ID: HGNC:2470 | Ensembl Gene: ENSG00000175183 | OMIM ID: 601871 |
| Drug and gene relationship at DGIdb | |||
Expression of CSRP2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CSRP2 | 1466 | 207030_s_at | -0.1350 | 0.8800 | |
| GSE20347 | CSRP2 | 1466 | 207030_s_at | -0.3244 | 0.1631 | |
| GSE23400 | CSRP2 | 1466 | 207030_s_at | -0.2982 | 0.0562 | |
| GSE26886 | CSRP2 | 1466 | 207030_s_at | -0.9941 | 0.0012 | |
| GSE29001 | CSRP2 | 1466 | 207030_s_at | 0.2968 | 0.6803 | |
| GSE38129 | CSRP2 | 1466 | 207030_s_at | -0.4228 | 0.0124 | |
| GSE45670 | CSRP2 | 1466 | 207030_s_at | -0.0156 | 0.9639 | |
| GSE53622 | CSRP2 | 1466 | 122453 | -0.3343 | 0.0057 | |
| GSE53624 | CSRP2 | 1466 | 122453 | -0.2327 | 0.0217 | |
| GSE63941 | CSRP2 | 1466 | 207030_s_at | -2.1155 | 0.0808 | |
| GSE77861 | CSRP2 | 1466 | 207030_s_at | -0.1210 | 0.7918 | |
| GSE97050 | CSRP2 | 1466 | A_23_P44724 | -0.3790 | 0.2226 | |
| SRP007169 | CSRP2 | 1466 | RNAseq | 0.3716 | 0.4102 | |
| SRP008496 | CSRP2 | 1466 | RNAseq | 0.0527 | 0.8366 | |
| SRP064894 | CSRP2 | 1466 | RNAseq | -0.6383 | 0.0021 | |
| SRP133303 | CSRP2 | 1466 | RNAseq | -0.1747 | 0.6238 | |
| SRP159526 | CSRP2 | 1466 | RNAseq | -0.3786 | 0.4123 | |
| SRP193095 | CSRP2 | 1466 | RNAseq | -0.5634 | 0.0361 | |
| SRP219564 | CSRP2 | 1466 | RNAseq | -0.9478 | 0.1277 | |
| TCGA | CSRP2 | 1466 | RNAseq | 0.1391 | 0.2040 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CSRP2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CSRP2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CSRP2 | 1466 | 3 | 4 | 23 | |
| GSE20123 | CSRP2 | 1466 | 3 | 4 | 23 | |
| GSE43470 | CSRP2 | 1466 | 3 | 1 | 39 | |
| GSE46452 | CSRP2 | 1466 | 8 | 1 | 50 | |
| GSE47630 | CSRP2 | 1466 | 10 | 1 | 29 | |
| GSE54993 | CSRP2 | 1466 | 0 | 5 | 65 | |
| GSE54994 | CSRP2 | 1466 | 6 | 1 | 46 | |
| GSE60625 | CSRP2 | 1466 | 0 | 0 | 11 | |
| GSE74703 | CSRP2 | 1466 | 3 | 1 | 32 | |
| GSE74704 | CSRP2 | 1466 | 2 | 2 | 16 | |
| TCGA | CSRP2 | 1466 | 14 | 15 | 67 |
Total number of gains: 52; Total number of losses: 35; Total Number of normals: 401.
Somatic mutations of CSRP2:
Generating mutation plots.
Highly correlated genes for CSRP2:
Showing top 20/158 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CSRP2 | DPH5 | 0.732858 | 3 | 0 | 3 |
| CSRP2 | AGGF1 | 0.72603 | 3 | 0 | 3 |
| CSRP2 | KCTD21 | 0.721931 | 3 | 0 | 3 |
| CSRP2 | HNRNPA0 | 0.7205 | 3 | 0 | 3 |
| CSRP2 | KPNA3 | 0.698203 | 3 | 0 | 3 |
| CSRP2 | WDR37 | 0.693257 | 3 | 0 | 3 |
| CSRP2 | CHMP5 | 0.691283 | 3 | 0 | 3 |
| CSRP2 | SNW1 | 0.691125 | 3 | 0 | 3 |
| CSRP2 | ITFG2 | 0.69048 | 3 | 0 | 3 |
| CSRP2 | ZNF256 | 0.688377 | 3 | 0 | 3 |
| CSRP2 | DEK | 0.683799 | 3 | 0 | 3 |
| CSRP2 | LIPA | 0.678969 | 3 | 0 | 3 |
| CSRP2 | BTN3A2 | 0.67731 | 3 | 0 | 3 |
| CSRP2 | ST3GAL6 | 0.676362 | 3 | 0 | 3 |
| CSRP2 | NPHP3 | 0.671208 | 3 | 0 | 3 |
| CSRP2 | SLC30A5 | 0.665728 | 3 | 0 | 3 |
| CSRP2 | MBLAC2 | 0.662778 | 4 | 0 | 3 |
| CSRP2 | ATP9A | 0.661706 | 3 | 0 | 3 |
| CSRP2 | ZNF573 | 0.661671 | 3 | 0 | 3 |
| CSRP2 | GNAI1 | 0.660963 | 5 | 0 | 4 |
For details and further investigation, click here
