KCTD21

 

Full name: potassium channel tetramerization domain containing 21 Alias Symbol: KCASH2
Type: protein-coding gene Cytoband: 11q14.1
Entrez ID: 283219 HGNC ID: HGNC:27452 Ensembl Gene: ENSG00000188997 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of KCTD21:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KCTD21 283219 229873_at -0.2833 0.7606
GSE26886 KCTD21 283219 229873_at -0.5884 0.0447
GSE45670 KCTD21 283219 229873_at -0.0750 0.7776
GSE53622 KCTD21 283219 106136 0.2442 0.0002
GSE53624 KCTD21 283219 106136 0.0593 0.3662
GSE63941 KCTD21 283219 229873_at -1.5353 0.0252
GSE77861 KCTD21 283219 229873_at -0.3510 0.2657
GSE97050 KCTD21 283219 A_33_P3299525 -0.0827 0.7060
SRP007169 KCTD21 283219 RNAseq -0.4326 0.3516
SRP064894 KCTD21 283219 RNAseq -0.8185 0.0000
SRP133303 KCTD21 283219 RNAseq -0.7164 0.0000
SRP159526 KCTD21 283219 RNAseq -1.1410 0.0115
SRP193095 KCTD21 283219 RNAseq -0.8522 0.0000
SRP219564 KCTD21 283219 RNAseq -0.2031 0.6389
TCGA KCTD21 283219 RNAseq -0.0279 0.7534

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by KCTD21 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KCTD21:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KCTD21 283219 3 10 17
GSE20123 KCTD21 283219 3 9 18
GSE43470 KCTD21 283219 3 5 35
GSE46452 KCTD21 283219 7 22 30
GSE47630 KCTD21 283219 4 17 19
GSE54993 KCTD21 283219 8 2 60
GSE54994 KCTD21 283219 5 17 31
GSE60625 KCTD21 283219 4 3 4
GSE74703 KCTD21 283219 2 4 30
GSE74704 KCTD21 283219 3 5 12
TCGA KCTD21 283219 18 32 46

Total number of gains: 60; Total number of losses: 126; Total Number of normals: 302.  


 

Somatic mutations of KCTD21:

 

Generating mutation plots.

 

Highly correlated genes for KCTD21:

 

Showing top 20/229 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KCTD21ENOSF10.788902303
KCTD21NAV20.768363303
KCTD21SERPINB80.758768303
KCTD21GTF3C10.748573303
KCTD21PODNL10.74726303
KCTD21HIBCH0.745137403
KCTD21CD2AP0.735093404
KCTD21ALAS10.731242303
KCTD21DIMT10.727667303
KCTD21FAM161B0.724694303
KCTD21CSRP20.721931303
KCTD21PKIA0.719817303
KCTD21ARID1B0.715815303
KCTD21ANKRD120.715689303
KCTD21LUC7L20.712281303
KCTD21CAPN30.711852403
KCTD21TJP10.711241303
KCTD21DYNC1I20.710985404
KCTD21EIF2B40.709747505
KCTD21ST50.708834303

For details and further investigation, click here