CXXC4

 

Full name: CXXC finger protein 4 Alias Symbol: IDAX
Type: protein-coding gene Cytoband: 4q24
Entrez ID: 80319 HGNC ID: HGNC:24593 Ensembl Gene: ENSG00000168772 OMIM ID: 611645
Drug and gene relationship at DGIdb

 

CXXC4 involved pathways:

KEGG pathway Description View
hsa04310Wnt signaling pathway

 

Expression of CXXC4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CXXC4 80319 220277_at -0.0612 0.9078
GSE20347 CXXC4 80319 220277_at 0.0150 0.9040
GSE23400 CXXC4 80319 220277_at -0.1287 0.0008
GSE26886 CXXC4 80319 220277_at 0.4391 0.0077
GSE29001 CXXC4 80319 220277_at -0.1726 0.1795
GSE38129 CXXC4 80319 220277_at -0.0595 0.6928
GSE45670 CXXC4 80319 220277_at -0.3392 0.0001
GSE53622 CXXC4 80319 135413 -0.5465 0.0556
GSE53624 CXXC4 80319 135413 0.1437 0.5037
GSE63941 CXXC4 80319 220277_at 0.3295 0.3479
GSE77861 CXXC4 80319 220277_at -0.1127 0.2965
SRP133303 CXXC4 80319 RNAseq 0.2087 0.6065
SRP159526 CXXC4 80319 RNAseq 2.3954 0.0063
TCGA CXXC4 80319 RNAseq -0.2289 0.7120

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by CXXC4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CXXC4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CXXC4 80319 0 12 18
GSE20123 CXXC4 80319 0 12 18
GSE43470 CXXC4 80319 0 13 30
GSE46452 CXXC4 80319 1 36 22
GSE47630 CXXC4 80319 0 20 20
GSE54993 CXXC4 80319 9 0 61
GSE54994 CXXC4 80319 1 10 42
GSE60625 CXXC4 80319 0 3 8
GSE74703 CXXC4 80319 0 11 25
GSE74704 CXXC4 80319 0 6 14
TCGA CXXC4 80319 7 38 51

Total number of gains: 18; Total number of losses: 161; Total Number of normals: 309.  


 

Somatic mutations of CXXC4:

 

Generating mutation plots.

 

Highly correlated genes for CXXC4:

 

Showing top 20/156 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CXXC4B4GALT60.695989404
CXXC4MAATS10.647708404
CXXC4RBPMS20.628947303
CXXC4MTFR1L0.618716303
CXXC4CLDN30.616863503
CXXC4USP27X-AS10.61133303
CXXC4TMEM170B0.604753403
CXXC4RASSF20.598791503
CXXC4PLCL10.594638605
CXXC4YPEL10.593889705
CXXC4TTLL10.590318403
CXXC4MYBPC10.589677403
CXXC4ZBTB100.588581303
CXXC4TRAM2-AS10.587091403
CXXC4PENK0.586743404
CXXC4HIGD2A0.586548503
CXXC4MB0.586037604
CXXC4PLEKHB10.585156706
CXXC4RNFT20.579805503
CXXC4WDR350.578232503

For details and further investigation, click here