| Full name: ring finger protein, transmembrane 2 | Alias Symbol: FLJ14627 | ||
| Type: protein-coding gene | Cytoband: 12q24.22 | ||
| Entrez ID: 84900 | HGNC ID: HGNC:25905 | Ensembl Gene: ENSG00000135119 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RNFT2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RNFT2 | 84900 | 221908_at | 0.4094 | 0.6256 | |
| GSE20347 | RNFT2 | 84900 | 221908_at | 0.0322 | 0.8262 | |
| GSE23400 | RNFT2 | 84900 | 221908_at | -0.1597 | 0.0058 | |
| GSE26886 | RNFT2 | 84900 | 221908_at | 1.0031 | 0.0150 | |
| GSE29001 | RNFT2 | 84900 | 221908_at | 0.2415 | 0.5288 | |
| GSE38129 | RNFT2 | 84900 | 221908_at | -0.1064 | 0.4321 | |
| GSE45670 | RNFT2 | 84900 | 221908_at | 0.2776 | 0.2138 | |
| GSE53622 | RNFT2 | 84900 | 55240 | 1.4741 | 0.0000 | |
| GSE53624 | RNFT2 | 84900 | 113723 | 1.9382 | 0.0000 | |
| GSE63941 | RNFT2 | 84900 | 221909_at | 1.7495 | 0.0366 | |
| GSE77861 | RNFT2 | 84900 | 1553209_at | -0.0676 | 0.5291 | |
| GSE97050 | RNFT2 | 84900 | A_33_P3230103 | 0.6664 | 0.2434 | |
| SRP133303 | RNFT2 | 84900 | RNAseq | 2.1183 | 0.0006 | |
| SRP159526 | RNFT2 | 84900 | RNAseq | 3.1003 | 0.0000 | |
| SRP219564 | RNFT2 | 84900 | RNAseq | 0.6893 | 0.2122 | |
| TCGA | RNFT2 | 84900 | RNAseq | 0.3980 | 0.1084 |
Upregulated datasets: 6; Downregulated datasets: 0.
Survival by RNFT2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RNFT2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RNFT2 | 84900 | 4 | 3 | 23 | |
| GSE20123 | RNFT2 | 84900 | 4 | 3 | 23 | |
| GSE43470 | RNFT2 | 84900 | 2 | 0 | 41 | |
| GSE46452 | RNFT2 | 84900 | 9 | 1 | 49 | |
| GSE47630 | RNFT2 | 84900 | 9 | 3 | 28 | |
| GSE54993 | RNFT2 | 84900 | 0 | 5 | 65 | |
| GSE54994 | RNFT2 | 84900 | 6 | 5 | 42 | |
| GSE60625 | RNFT2 | 84900 | 0 | 0 | 11 | |
| GSE74703 | RNFT2 | 84900 | 2 | 0 | 34 | |
| GSE74704 | RNFT2 | 84900 | 2 | 2 | 16 | |
| TCGA | RNFT2 | 84900 | 22 | 10 | 64 |
Total number of gains: 60; Total number of losses: 32; Total Number of normals: 396.
Somatic mutations of RNFT2:
Generating mutation plots.
Highly correlated genes for RNFT2:
Showing top 20/533 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RNFT2 | CCDC124 | 0.809659 | 3 | 0 | 3 |
| RNFT2 | SNRPD3 | 0.791321 | 3 | 0 | 3 |
| RNFT2 | LEMD2 | 0.78763 | 3 | 0 | 3 |
| RNFT2 | POLRMT | 0.787212 | 4 | 0 | 4 |
| RNFT2 | ACSS2 | 0.784222 | 3 | 0 | 3 |
| RNFT2 | YIPF3 | 0.783192 | 3 | 0 | 3 |
| RNFT2 | ARF3 | 0.760187 | 3 | 0 | 3 |
| RNFT2 | MRPL4 | 0.758531 | 3 | 0 | 3 |
| RNFT2 | RFXANK | 0.756624 | 3 | 0 | 3 |
| RNFT2 | ARPC4 | 0.752656 | 3 | 0 | 3 |
| RNFT2 | TMEM41A | 0.74581 | 3 | 0 | 3 |
| RNFT2 | SLC35C2 | 0.74068 | 3 | 0 | 3 |
| RNFT2 | MED12 | 0.738774 | 3 | 0 | 3 |
| RNFT2 | SH2B1 | 0.737758 | 3 | 0 | 3 |
| RNFT2 | MPND | 0.72961 | 3 | 0 | 3 |
| RNFT2 | KHSRP | 0.728044 | 3 | 0 | 3 |
| RNFT2 | MXD3 | 0.723854 | 3 | 0 | 3 |
| RNFT2 | MED14 | 0.723638 | 3 | 0 | 3 |
| RNFT2 | USP36 | 0.719619 | 3 | 0 | 3 |
| RNFT2 | TAF10 | 0.718286 | 4 | 0 | 4 |
For details and further investigation, click here
