EFEMP2

 

Full name: EGF containing fibulin extracellular matrix protein 2 Alias Symbol: FBLN4|UPH1
Type: protein-coding gene Cytoband: 11q13.1
Entrez ID: 30008 HGNC ID: HGNC:3219 Ensembl Gene: ENSG00000172638 OMIM ID: 604633
Drug and gene relationship at DGIdb

 

Expression of EFEMP2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EFEMP2 30008 206580_s_at -0.0772 0.9246
GSE20347 EFEMP2 30008 206580_s_at 0.5883 0.0016
GSE23400 EFEMP2 30008 206580_s_at 0.0667 0.4305
GSE26886 EFEMP2 30008 206580_s_at 1.9967 0.0000
GSE29001 EFEMP2 30008 206580_s_at 0.5256 0.2225
GSE38129 EFEMP2 30008 206580_s_at 0.1951 0.5085
GSE45670 EFEMP2 30008 206580_s_at -0.9319 0.0035
GSE53622 EFEMP2 30008 48505 0.7013 0.0000
GSE53624 EFEMP2 30008 48505 0.9037 0.0000
GSE63941 EFEMP2 30008 206580_s_at -5.3929 0.0000
GSE77861 EFEMP2 30008 209356_x_at 0.1953 0.3106
GSE97050 EFEMP2 30008 A_33_P3367830 0.1798 0.6083
SRP007169 EFEMP2 30008 RNAseq 2.0636 0.0003
SRP008496 EFEMP2 30008 RNAseq 2.9941 0.0000
SRP064894 EFEMP2 30008 RNAseq 1.2317 0.0025
SRP133303 EFEMP2 30008 RNAseq 0.6362 0.0663
SRP159526 EFEMP2 30008 RNAseq 0.5077 0.1374
SRP193095 EFEMP2 30008 RNAseq 1.3935 0.0000
SRP219564 EFEMP2 30008 RNAseq 0.1216 0.8791
TCGA EFEMP2 30008 RNAseq -0.1073 0.3932

Upregulated datasets: 5; Downregulated datasets: 1.  


 

Survival by EFEMP2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EFEMP2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EFEMP2 30008 8 5 17
GSE20123 EFEMP2 30008 8 5 17
GSE43470 EFEMP2 30008 6 1 36
GSE46452 EFEMP2 30008 11 3 45
GSE47630 EFEMP2 30008 7 5 28
GSE54993 EFEMP2 30008 3 0 67
GSE54994 EFEMP2 30008 7 5 41
GSE60625 EFEMP2 30008 0 3 8
GSE74703 EFEMP2 30008 4 0 32
GSE74704 EFEMP2 30008 6 3 11
TCGA EFEMP2 30008 23 7 66

Total number of gains: 83; Total number of losses: 37; Total Number of normals: 368.  


 

Somatic mutations of EFEMP2:

 

Generating mutation plots.

 

Highly correlated genes for EFEMP2:

 

Showing top 20/1489 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EFEMP2FKBP70.800549707
EFEMP2KRTCAP20.793991303
EFEMP2AEBP10.79164213013
EFEMP2CLMP0.789347706
EFEMP2ISLR0.78388513013
EFEMP2COL6A10.78247713013
EFEMP2SNAPC40.782275303
EFEMP2COL6A20.78218213013
EFEMP2RNASEH2C0.781102303
EFEMP2FSTL10.77794913012
EFEMP2LAMA40.770412012
EFEMP2COL8A10.76977310010
EFEMP2A1BG0.768074404
EFEMP2MCAM0.7675781009
EFEMP2ANGPTL40.764081303
EFEMP2ANO60.762998808
EFEMP2RILPL10.761715404
EFEMP2DNM3OS0.760143303
EFEMP2SLC39A130.758005707
EFEMP2RAB340.757289303

For details and further investigation, click here