| Full name: solute carrier family 39 member 13 | Alias Symbol: FLJ25785 | ||
| Type: protein-coding gene | Cytoband: 11p11.2 | ||
| Entrez ID: 91252 | HGNC ID: HGNC:20859 | Ensembl Gene: ENSG00000165915 | OMIM ID: 608735 |
| Drug and gene relationship at DGIdb | |||
Expression of SLC39A13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SLC39A13 | 91252 | 225277_at | 0.2903 | 0.5327 | |
| GSE26886 | SLC39A13 | 91252 | 225277_at | 1.3299 | 0.0000 | |
| GSE45670 | SLC39A13 | 91252 | 225277_at | 0.1752 | 0.4089 | |
| GSE53622 | SLC39A13 | 91252 | 74676 | 0.6019 | 0.0000 | |
| GSE53624 | SLC39A13 | 91252 | 74676 | 0.9134 | 0.0000 | |
| GSE63941 | SLC39A13 | 91252 | 225277_at | -1.9185 | 0.0002 | |
| GSE77861 | SLC39A13 | 91252 | 225277_at | 0.3596 | 0.0357 | |
| GSE97050 | SLC39A13 | 91252 | A_23_P24345 | 0.1507 | 0.6565 | |
| SRP007169 | SLC39A13 | 91252 | RNAseq | 1.5296 | 0.0085 | |
| SRP008496 | SLC39A13 | 91252 | RNAseq | 1.7304 | 0.0000 | |
| SRP064894 | SLC39A13 | 91252 | RNAseq | 0.9959 | 0.0000 | |
| SRP133303 | SLC39A13 | 91252 | RNAseq | 0.7896 | 0.0063 | |
| SRP159526 | SLC39A13 | 91252 | RNAseq | 0.7186 | 0.0540 | |
| SRP193095 | SLC39A13 | 91252 | RNAseq | 1.0516 | 0.0000 | |
| SRP219564 | SLC39A13 | 91252 | RNAseq | 0.1727 | 0.7624 | |
| TCGA | SLC39A13 | 91252 | RNAseq | -0.0682 | 0.2592 |
Upregulated datasets: 4; Downregulated datasets: 1.
Survival by SLC39A13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SLC39A13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SLC39A13 | 91252 | 3 | 7 | 20 | |
| GSE20123 | SLC39A13 | 91252 | 3 | 6 | 21 | |
| GSE43470 | SLC39A13 | 91252 | 1 | 4 | 38 | |
| GSE46452 | SLC39A13 | 91252 | 8 | 5 | 46 | |
| GSE47630 | SLC39A13 | 91252 | 3 | 9 | 28 | |
| GSE54993 | SLC39A13 | 91252 | 3 | 0 | 67 | |
| GSE54994 | SLC39A13 | 91252 | 1 | 11 | 41 | |
| GSE60625 | SLC39A13 | 91252 | 0 | 0 | 11 | |
| GSE74703 | SLC39A13 | 91252 | 1 | 2 | 33 | |
| GSE74704 | SLC39A13 | 91252 | 2 | 4 | 14 | |
| TCGA | SLC39A13 | 91252 | 10 | 20 | 66 |
Total number of gains: 35; Total number of losses: 68; Total Number of normals: 385.
Somatic mutations of SLC39A13:
Generating mutation plots.
Highly correlated genes for SLC39A13:
Showing top 20/1496 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SLC39A13 | FAM160B1 | 0.890624 | 3 | 0 | 3 |
| SLC39A13 | C11orf96 | 0.862787 | 3 | 0 | 3 |
| SLC39A13 | ZNF358 | 0.837296 | 3 | 0 | 3 |
| SLC39A13 | EDNRB | 0.808948 | 3 | 0 | 3 |
| SLC39A13 | CDC42EP4 | 0.808085 | 4 | 0 | 4 |
| SLC39A13 | SLC25A38 | 0.803481 | 3 | 0 | 3 |
| SLC39A13 | ARMC9 | 0.803239 | 4 | 0 | 4 |
| SLC39A13 | ALKBH6 | 0.800767 | 3 | 0 | 3 |
| SLC39A13 | ADCY3 | 0.799937 | 3 | 0 | 3 |
| SLC39A13 | FAM20B | 0.799613 | 3 | 0 | 3 |
| SLC39A13 | HNRNPU | 0.798364 | 3 | 0 | 3 |
| SLC39A13 | LRP3 | 0.79062 | 5 | 0 | 5 |
| SLC39A13 | GLIS2 | 0.781492 | 7 | 0 | 7 |
| SLC39A13 | BICC1 | 0.780441 | 4 | 0 | 4 |
| SLC39A13 | RAB34 | 0.778433 | 3 | 0 | 3 |
| SLC39A13 | UBA2 | 0.774106 | 3 | 0 | 3 |
| SLC39A13 | ZFAND3 | 0.767478 | 3 | 0 | 3 |
| SLC39A13 | UROS | 0.767457 | 3 | 0 | 3 |
| SLC39A13 | SLC16A4 | 0.766953 | 3 | 0 | 3 |
| SLC39A13 | MCAM | 0.766315 | 5 | 0 | 5 |
For details and further investigation, click here
