MCAM

 

Full name: melanoma cell adhesion molecule Alias Symbol: MUC18|CD146|MelCAM|METCAM|HEMCAM
Type: protein-coding gene Cytoband: 11q23.3
Entrez ID: 4162 HGNC ID: HGNC:6934 Ensembl Gene: ENSG00000076706 OMIM ID: 155735
Drug and gene relationship at DGIdb

 

Expression of MCAM:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 MCAM 4162 209087_x_at -0.3086 0.7369
GSE20347 MCAM 4162 209087_x_at 0.6367 0.0200
GSE23400 MCAM 4162 209087_x_at -0.1935 0.2708
GSE26886 MCAM 4162 209087_x_at 1.6491 0.0001
GSE29001 MCAM 4162 209087_x_at 0.7788 0.0834
GSE38129 MCAM 4162 209087_x_at -0.1520 0.7549
GSE45670 MCAM 4162 209087_x_at -0.9320 0.0137
GSE63941 MCAM 4162 209087_x_at -3.6926 0.0004
GSE77861 MCAM 4162 209087_x_at 0.8181 0.0594
GSE97050 MCAM 4162 A_23_P162171 -0.7035 0.1356
SRP007169 MCAM 4162 RNAseq 2.6949 0.0000
SRP008496 MCAM 4162 RNAseq 2.5688 0.0000
SRP064894 MCAM 4162 RNAseq 0.2146 0.3409
SRP133303 MCAM 4162 RNAseq -0.3889 0.2554
SRP159526 MCAM 4162 RNAseq -0.5021 0.1729
SRP193095 MCAM 4162 RNAseq 2.0011 0.0000
SRP219564 MCAM 4162 RNAseq -0.4964 0.5654
TCGA MCAM 4162 RNAseq -0.2262 0.0117

Upregulated datasets: 4; Downregulated datasets: 1.  


 

Survival by MCAM expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of MCAM:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 MCAM 4162 1 11 18
GSE20123 MCAM 4162 1 11 18
GSE43470 MCAM 4162 2 8 33
GSE46452 MCAM 4162 3 26 30
GSE47630 MCAM 4162 2 19 19
GSE54993 MCAM 4162 10 0 60
GSE54994 MCAM 4162 5 19 29
GSE60625 MCAM 4162 0 3 8
GSE74703 MCAM 4162 1 5 30
GSE74704 MCAM 4162 0 7 13
TCGA MCAM 4162 4 51 41

Total number of gains: 29; Total number of losses: 160; Total Number of normals: 299.  


 

Somatic mutations of MCAM:

 

Generating mutation plots.

 

Highly correlated genes for MCAM:

 

Showing top 20/1410 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
MCAMLIX1L0.815242606
MCAMMSRB30.811423404
MCAMGLIPR20.802875505
MCAMCLMP0.80172504
MCAMPRKG10.800064707
MCAMDOCK110.796112606
MCAMPKIG0.792731909
MCAMPLBD20.785903303
MCAMTP53I130.784239303
MCAMANXA60.782749909
MCAMMRGPRF0.778606606
MCAMHMCN10.778461606
MCAMSGCE0.776062808
MCAMC11orf960.774665504
MCAMCTHRC10.77213303
MCAMPLEKHO10.7700111009
MCAMFLNA0.768129909
MCAMEFEMP20.7675781009
MCAMUBE2Q20.766547303
MCAMSLC25A300.766375303

For details and further investigation, click here