FAT2

 

Full name: FAT atypical cadherin 2 Alias Symbol: MEGF1|CDHF8|HFAT2|CDHR9
Type: protein-coding gene Cytoband: 5q33.1
Entrez ID: 2196 HGNC ID: HGNC:3596 Ensembl Gene: ENSG00000086570 OMIM ID: 604269
Drug and gene relationship at DGIdb

 

Expression of FAT2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAT2 2196 208153_s_at 0.6294 0.3990
GSE20347 FAT2 2196 208153_s_at -0.1479 0.5738
GSE23400 FAT2 2196 208153_s_at 0.1348 0.3945
GSE26886 FAT2 2196 208153_s_at -0.1424 0.7766
GSE29001 FAT2 2196 208153_s_at 0.0603 0.8767
GSE38129 FAT2 2196 208153_s_at 0.5310 0.1893
GSE45670 FAT2 2196 208153_s_at 0.4931 0.0346
GSE53622 FAT2 2196 9995 0.4901 0.0820
GSE53624 FAT2 2196 9995 0.0442 0.8064
GSE63941 FAT2 2196 208153_s_at 2.8595 0.0661
GSE77861 FAT2 2196 208153_s_at -0.0101 0.9881
GSE97050 FAT2 2196 A_23_P81507 0.5925 0.2694
SRP007169 FAT2 2196 RNAseq 0.1823 0.7927
SRP008496 FAT2 2196 RNAseq 0.2496 0.5241
SRP064894 FAT2 2196 RNAseq -0.2633 0.5089
SRP133303 FAT2 2196 RNAseq 0.6009 0.1707
SRP159526 FAT2 2196 RNAseq -0.1237 0.8369
SRP193095 FAT2 2196 RNAseq 0.1983 0.6973
TCGA FAT2 2196 RNAseq 1.3342 0.0000

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by FAT2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FAT2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAT2 2196 1 12 17
GSE20123 FAT2 2196 1 12 17
GSE43470 FAT2 2196 2 11 30
GSE46452 FAT2 2196 0 27 32
GSE47630 FAT2 2196 0 20 20
GSE54993 FAT2 2196 9 1 60
GSE54994 FAT2 2196 2 16 35
GSE60625 FAT2 2196 0 0 11
GSE74703 FAT2 2196 2 8 26
GSE74704 FAT2 2196 1 7 12
TCGA FAT2 2196 6 40 50

Total number of gains: 24; Total number of losses: 154; Total Number of normals: 310.  


 

Somatic mutations of FAT2:

 

Generating mutation plots.

 

Highly correlated genes for FAT2:

 

Showing top 20/321 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAT2RAPGEFL10.740918404
FAT2ALPK10.706828303
FAT2B3GNT50.689869303
FAT2CLDN70.687285303
FAT2CSTA0.676695303
FAT2KLF50.675348404
FAT2HES20.670487606
FAT2STAP20.665165403
FAT2CDK5R10.657995505
FAT2TMPRSS40.641764404
FAT2NEDD80.637336303
FAT2FAM83B0.636919604
FAT2MTMR10.636082403
FAT2TSEN540.633267303
FAT2ETFB0.632303303
FAT2MIR205HG0.626302504
FAT2SERPINB130.625982404
FAT2PIGW0.62586303
FAT2FERMT10.625326705
FAT2SLC37A20.625012504

For details and further investigation, click here