GCC1

 

Full name: GRIP and coiled-coil domain containing 1 Alias Symbol: FLJ22035|GCC88|GCC1P|MGC20706
Type: protein-coding gene Cytoband: 7q32.1
Entrez ID: 79571 HGNC ID: HGNC:19095 Ensembl Gene: ENSG00000179562 OMIM ID: 607418
Drug and gene relationship at DGIdb

 

Expression of GCC1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GCC1 79571 218912_at 0.1485 0.7793
GSE20347 GCC1 79571 218912_at 0.2566 0.0041
GSE23400 GCC1 79571 218912_at -0.0078 0.8607
GSE26886 GCC1 79571 218912_at -0.3099 0.1714
GSE29001 GCC1 79571 218912_at 0.0669 0.7115
GSE38129 GCC1 79571 218912_at 0.2430 0.0014
GSE45670 GCC1 79571 218912_at 0.3816 0.0006
GSE53622 GCC1 79571 48927 0.0256 0.8217
GSE53624 GCC1 79571 48927 0.1906 0.0379
GSE63941 GCC1 79571 218912_at -0.6900 0.0541
GSE77861 GCC1 79571 218912_at 0.2541 0.2715
GSE97050 GCC1 79571 A_23_P71094 0.2744 0.3940
SRP007169 GCC1 79571 RNAseq 0.4542 0.2361
SRP008496 GCC1 79571 RNAseq 0.3553 0.1844
SRP064894 GCC1 79571 RNAseq 0.1854 0.1401
SRP133303 GCC1 79571 RNAseq 0.3777 0.0271
SRP159526 GCC1 79571 RNAseq -0.0425 0.8582
SRP193095 GCC1 79571 RNAseq -0.0261 0.7788
SRP219564 GCC1 79571 RNAseq -0.1062 0.7109
TCGA GCC1 79571 RNAseq -0.0790 0.1280

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by GCC1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GCC1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GCC1 79571 7 1 22
GSE20123 GCC1 79571 7 2 21
GSE43470 GCC1 79571 2 3 38
GSE46452 GCC1 79571 7 2 50
GSE47630 GCC1 79571 7 4 29
GSE54993 GCC1 79571 3 5 62
GSE54994 GCC1 79571 9 7 37
GSE60625 GCC1 79571 0 0 11
GSE74703 GCC1 79571 2 3 31
GSE74704 GCC1 79571 3 2 15
TCGA GCC1 79571 27 22 47

Total number of gains: 74; Total number of losses: 51; Total Number of normals: 363.  


 

Somatic mutations of GCC1:

 

Generating mutation plots.

 

Highly correlated genes for GCC1:

 

Showing top 20/536 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GCC1ZNF5640.791435303
GCC1EAPP0.774364303
GCC1MPHOSPH90.772104303
GCC1SRSF60.77129303
GCC1DNASE20.763155404
GCC1KANSL20.76296303
GCC1NUDT190.757705303
GCC1ZNF7760.731106303
GCC1FBXO330.720902404
GCC1KTI120.720805303
GCC1TDG0.716872303
GCC1C1orf430.715095303
GCC1CNOT100.712517403
GCC1FBXW90.711928404
GCC1CHCHD60.710304505
GCC1ZNF8790.710272303
GCC1BROX0.708161303
GCC1ARL60.707464403
GCC1CSTF2T0.702231403
GCC1CHAMP10.701982303

For details and further investigation, click here