HSPA12B

 

Full name: heat shock protein family A (Hsp70) member 12B Alias Symbol: dJ1009E24.2
Type: protein-coding gene Cytoband: 20p13
Entrez ID: 116835 HGNC ID: HGNC:16193 Ensembl Gene: ENSG00000132622 OMIM ID: 610702
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of HSPA12B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HSPA12B 116835 229172_at -0.1818 0.7286
GSE26886 HSPA12B 116835 229172_at 0.1163 0.5874
GSE45670 HSPA12B 116835 229172_at -0.4545 0.0158
GSE53622 HSPA12B 116835 97276 -0.7600 0.0000
GSE53624 HSPA12B 116835 97276 -0.4570 0.0000
GSE63941 HSPA12B 116835 229172_at -0.1155 0.4813
GSE77861 HSPA12B 116835 229172_at -0.0224 0.8557
GSE97050 HSPA12B 116835 A_23_P91334 -0.3060 0.3603
SRP064894 HSPA12B 116835 RNAseq 0.9691 0.0211
SRP133303 HSPA12B 116835 RNAseq -0.3834 0.1949
SRP159526 HSPA12B 116835 RNAseq 0.3054 0.4919
SRP193095 HSPA12B 116835 RNAseq 0.8445 0.0001
SRP219564 HSPA12B 116835 RNAseq 0.2226 0.7032
TCGA HSPA12B 116835 RNAseq -0.3513 0.0122

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by HSPA12B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HSPA12B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HSPA12B 116835 12 3 15
GSE20123 HSPA12B 116835 13 3 14
GSE43470 HSPA12B 116835 10 1 32
GSE46452 HSPA12B 116835 26 1 32
GSE47630 HSPA12B 116835 18 4 18
GSE54993 HSPA12B 116835 2 14 54
GSE54994 HSPA12B 116835 24 2 27
GSE60625 HSPA12B 116835 0 0 11
GSE74703 HSPA12B 116835 9 1 26
GSE74704 HSPA12B 116835 8 1 11
TCGA HSPA12B 116835 39 11 46

Total number of gains: 161; Total number of losses: 41; Total Number of normals: 286.  


 

Somatic mutations of HSPA12B:

 

Generating mutation plots.

 

Highly correlated genes for HSPA12B:

 

Showing top 20/107 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HSPA12BHTR3A0.792956303
HSPA12BOR10G80.761645303
HSPA12BPHYHIP0.720184303
HSPA12BOR2Z10.711157303
HSPA12BTM6SF10.704902303
HSPA12BFGF170.704752303
HSPA12BGTF2IRD2B0.704344303
HSPA12BSIGLEC80.692913303
HSPA12BFAM171A20.686974303
HSPA12BUPB10.683486303
HSPA12BGPR1460.678753303
HSPA12BZMYND100.678506303
HSPA12BFGD50.673245403
HSPA12BGPR880.668058404
HSPA12BTCEAL70.667195504
HSPA12BCABP10.666127303
HSPA12BTXLNB0.653747403
HSPA12BCLCN10.652436303
HSPA12BRASGRF20.65101403
HSPA12BKLHL100.65021403

For details and further investigation, click here