| Full name: long intergenic non-protein coding RNA 608 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 2q35 | ||
| Entrez ID: 151300 | HGNC ID: HGNC:27179 | Ensembl Gene: ENSG00000236445 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00608:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00608 | 151300 | 239507_at | 0.0739 | 0.7819 | |
| GSE26886 | LINC00608 | 151300 | 239507_at | 0.4053 | 0.0042 | |
| GSE45670 | LINC00608 | 151300 | 239507_at | -0.0328 | 0.8077 | |
| GSE53622 | LINC00608 | 151300 | 82329 | 0.1590 | 0.0976 | |
| GSE53624 | LINC00608 | 151300 | 82329 | 0.3369 | 0.0391 | |
| GSE63941 | LINC00608 | 151300 | 239507_at | 0.2096 | 0.1727 | |
| GSE77861 | LINC00608 | 151300 | 239507_at | -0.0872 | 0.5283 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00608 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00608:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00608 | 151300 | 1 | 14 | 15 | |
| GSE20123 | LINC00608 | 151300 | 1 | 13 | 16 | |
| GSE43470 | LINC00608 | 151300 | 1 | 7 | 35 | |
| GSE46452 | LINC00608 | 151300 | 0 | 5 | 54 | |
| GSE47630 | LINC00608 | 151300 | 4 | 5 | 31 | |
| GSE54993 | LINC00608 | 151300 | 1 | 2 | 67 | |
| GSE54994 | LINC00608 | 151300 | 7 | 10 | 36 | |
| GSE60625 | LINC00608 | 151300 | 0 | 3 | 8 | |
| GSE74703 | LINC00608 | 151300 | 1 | 5 | 30 | |
| GSE74704 | LINC00608 | 151300 | 1 | 7 | 12 | |
| TCGA | LINC00608 | 151300 | 11 | 27 | 58 |
Total number of gains: 28; Total number of losses: 98; Total Number of normals: 362.
Somatic mutations of LINC00608:
Generating mutation plots.
Highly correlated genes for LINC00608:
Showing top 20/275 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00608 | LINC00161 | 0.751195 | 3 | 0 | 3 |
| LINC00608 | PTP4A3 | 0.706877 | 4 | 0 | 3 |
| LINC00608 | TMEM179 | 0.706157 | 4 | 0 | 4 |
| LINC00608 | FBLL1 | 0.705336 | 4 | 0 | 4 |
| LINC00608 | NPEPL1 | 0.701452 | 4 | 0 | 4 |
| LINC00608 | APC2 | 0.700139 | 3 | 0 | 3 |
| LINC00608 | FAM99B | 0.696445 | 4 | 0 | 4 |
| LINC00608 | RASL10B | 0.696417 | 4 | 0 | 3 |
| LINC00608 | KLK15 | 0.694789 | 4 | 0 | 4 |
| LINC00608 | EVX1 | 0.693809 | 5 | 0 | 5 |
| LINC00608 | CASR | 0.693096 | 3 | 0 | 3 |
| LINC00608 | GPR182 | 0.692426 | 3 | 0 | 3 |
| LINC00608 | ITGA2B | 0.689794 | 3 | 0 | 3 |
| LINC00608 | DUX1 | 0.689316 | 3 | 0 | 3 |
| LINC00608 | FUT7 | 0.685051 | 4 | 0 | 3 |
| LINC00608 | SEZ6L2 | 0.683187 | 4 | 0 | 4 |
| LINC00608 | GRIN1 | 0.679091 | 3 | 0 | 3 |
| LINC00608 | NOXO1 | 0.677869 | 4 | 0 | 3 |
| LINC00608 | MYBPC3 | 0.676575 | 4 | 0 | 3 |
| LINC00608 | DLG4 | 0.675219 | 3 | 0 | 3 |
For details and further investigation, click here
