SLAMF9

 

Full name: SLAM family member 9 Alias Symbol: CD2F-10|CD84-H1|SF2001
Type: protein-coding gene Cytoband: 1q23.2
Entrez ID: 89886 HGNC ID: HGNC:18430 Ensembl Gene: ENSG00000162723 OMIM ID: 608589
Drug and gene relationship at DGIdb

 

Expression of SLAMF9:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLAMF9 89886 1553770_a_at 0.2413 0.5303
GSE26886 SLAMF9 89886 1553770_a_at 0.2688 0.1586
GSE45670 SLAMF9 89886 1553770_a_at 0.6783 0.0442
GSE53622 SLAMF9 89886 101174 0.2186 0.0188
GSE53624 SLAMF9 89886 101174 0.2749 0.0058
GSE63941 SLAMF9 89886 1553770_a_at 0.1931 0.1249
GSE77861 SLAMF9 89886 1553770_a_at 0.4963 0.0972
GSE97050 SLAMF9 89886 A_23_P96833 -0.1600 0.4466
SRP007169 SLAMF9 89886 RNAseq 4.6476 0.0009
TCGA SLAMF9 89886 RNAseq 1.5785 0.0035

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by SLAMF9 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLAMF9:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLAMF9 89886 10 0 20
GSE20123 SLAMF9 89886 10 0 20
GSE43470 SLAMF9 89886 7 2 34
GSE46452 SLAMF9 89886 2 1 56
GSE47630 SLAMF9 89886 14 0 26
GSE54993 SLAMF9 89886 0 5 65
GSE54994 SLAMF9 89886 16 0 37
GSE60625 SLAMF9 89886 0 0 11
GSE74703 SLAMF9 89886 7 2 27
GSE74704 SLAMF9 89886 4 0 16
TCGA SLAMF9 89886 43 3 50

Total number of gains: 113; Total number of losses: 13; Total Number of normals: 362.  


 

Somatic mutations of SLAMF9:

 

Generating mutation plots.

 

Highly correlated genes for SLAMF9:

 

Showing top 20/215 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLAMF9OR1L60.792817303
SLAMF9CALB10.779995303
SLAMF9SPEG0.753142303
SLAMF9DUS20.742032303
SLAMF9KRTAP10-30.739865303
SLAMF9TCF230.735001303
SLAMF9TMEM2350.734948303
SLAMF9RBM170.723034303
SLAMF9LEPROTL10.722554505
SLAMF9GRIA40.712179303
SLAMF9FAM192A0.709042403
SLAMF9MDH1B0.707968303
SLAMF9CDH240.706013404
SLAMF9F2RL30.7049303
SLAMF9KRTAP10-90.700837303
SLAMF9USP2-AS10.691995303
SLAMF9FOSL10.678035303
SLAMF9MMP20.677512303
SLAMF9USP17L20.671723303
SLAMF9MSANTD30.671323303

For details and further investigation, click here