| Full name: long intergenic non-protein coding RNA 396 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 13q34 | ||
| Entrez ID: 104355146 | HGNC ID: HGNC:42724 | Ensembl Gene: ENSG00000231428 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00396:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00396 | 233529_at | -0.1438 | 0.4394 | ||
| GSE26886 | LINC00396 | 233529_at | 0.0601 | 0.5800 | ||
| GSE45670 | LINC00396 | 233529_at | 0.0600 | 0.5459 | ||
| GSE53622 | LINC00396 | 104355146 | 115480 | 0.0221 | 0.8368 | |
| GSE53624 | LINC00396 | 104355146 | 115480 | 0.2338 | 0.0312 | |
| GSE63941 | LINC00396 | 233529_at | 0.0981 | 0.5417 | ||
| GSE77861 | LINC00396 | 233529_at | -0.0802 | 0.4730 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00396 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00396:
No record found for this gene.
Somatic mutations of LINC00396:
Generating mutation plots.
Highly correlated genes for LINC00396:
Showing all 17 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00396 | KRT85 | 0.582813 | 3 | 0 | 3 |
| LINC00396 | PRSS55 | 0.561218 | 4 | 0 | 3 |
| LINC00396 | SLC22A25 | 0.55473 | 3 | 0 | 3 |
| LINC00396 | RXFP3 | 0.550354 | 4 | 0 | 3 |
| LINC00396 | UTS2R | 0.54671 | 4 | 0 | 3 |
| LINC00396 | KRT79 | 0.541149 | 3 | 0 | 3 |
| LINC00396 | RXFP2 | 0.539925 | 4 | 0 | 3 |
| LINC00396 | CELA3A | 0.536483 | 4 | 0 | 3 |
| LINC00396 | APOA2 | 0.528136 | 4 | 0 | 3 |
| LINC00396 | RPL34-AS1 | 0.527836 | 4 | 0 | 4 |
| LINC00396 | SPATA31E1 | 0.526212 | 6 | 0 | 3 |
| LINC00396 | LINC01136 | 0.518146 | 5 | 0 | 3 |
| LINC00396 | CLDN9 | 0.513235 | 4 | 0 | 3 |
| LINC00396 | IFNA21 | 0.512811 | 4 | 0 | 3 |
| LINC00396 | SLC4A9 | 0.512367 | 4 | 0 | 3 |
| LINC00396 | APOB | 0.510174 | 5 | 0 | 3 |
| LINC00396 | PSPN | 0.509599 | 5 | 0 | 4 |
For details and further investigation, click here
