| Full name: long intergenic non-protein coding RNA 622 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 1p12 | ||
| Entrez ID: 644242 | HGNC ID: HGNC:44251 | Ensembl Gene: ENSG00000260941 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00622:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00622 | 644242 | 1558404_at | 0.3631 | 0.3685 | |
| GSE26886 | LINC00622 | 644242 | 1558404_at | 0.7008 | 0.0234 | |
| GSE45670 | LINC00622 | 644242 | 1558404_at | 0.7786 | 0.1271 | |
| GSE53622 | LINC00622 | 644242 | 35432 | 0.3854 | 0.0002 | |
| GSE53624 | LINC00622 | 644242 | 35432 | 0.7051 | 0.0000 | |
| GSE63941 | LINC00622 | 644242 | 1558404_at | 0.3250 | 0.7981 | |
| GSE77861 | LINC00622 | 644242 | 1558404_at | 0.4551 | 0.3844 | |
| SRP133303 | LINC00622 | 644242 | RNAseq | 0.8898 | 0.0263 | |
| SRP159526 | LINC00622 | 644242 | RNAseq | 0.8589 | 0.2814 | |
| SRP219564 | LINC00622 | 644242 | RNAseq | 1.4084 | 0.0104 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by LINC00622 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00622:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00622 | 644242 | 3 | 5 | 22 | |
| GSE20123 | LINC00622 | 644242 | 4 | 5 | 21 | |
| GSE43470 | LINC00622 | 644242 | 1 | 3 | 39 | |
| GSE46452 | LINC00622 | 644242 | 2 | 1 | 56 | |
| GSE47630 | LINC00622 | 644242 | 10 | 4 | 26 | |
| GSE54993 | LINC00622 | 644242 | 0 | 2 | 68 | |
| GSE54994 | LINC00622 | 644242 | 12 | 1 | 40 | |
| GSE60625 | LINC00622 | 644242 | 0 | 0 | 11 | |
| GSE74703 | LINC00622 | 644242 | 1 | 3 | 32 | |
| GSE74704 | LINC00622 | 644242 | 2 | 3 | 15 | |
| TCGA | LINC00622 | 644242 | 18 | 23 | 55 |
Total number of gains: 53; Total number of losses: 50; Total Number of normals: 385.
Somatic mutations of LINC00622:
Generating mutation plots.
Highly correlated genes for LINC00622:
Showing top 20/87 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00622 | KIAA2013 | 0.726775 | 3 | 0 | 3 |
| LINC00622 | KDM1A | 0.704734 | 3 | 0 | 3 |
| LINC00622 | POLR2J | 0.700953 | 4 | 0 | 3 |
| LINC00622 | CD320 | 0.679083 | 3 | 0 | 3 |
| LINC00622 | SDCCAG8 | 0.659995 | 3 | 0 | 3 |
| LINC00622 | MAD2L2 | 0.659035 | 4 | 0 | 3 |
| LINC00622 | KIAA0040 | 0.656917 | 3 | 0 | 3 |
| LINC00622 | ECE1 | 0.653309 | 4 | 0 | 3 |
| LINC00622 | POP5 | 0.652124 | 3 | 0 | 3 |
| LINC00622 | TRIM27 | 0.63787 | 3 | 0 | 3 |
| LINC00622 | ERVMER34-1 | 0.637618 | 3 | 0 | 3 |
| LINC00622 | SLC25A19 | 0.637438 | 3 | 0 | 3 |
| LINC00622 | STOML1 | 0.626499 | 3 | 0 | 3 |
| LINC00622 | PRAF2 | 0.626244 | 4 | 0 | 3 |
| LINC00622 | POP7 | 0.616391 | 4 | 0 | 3 |
| LINC00622 | DPM3 | 0.61627 | 4 | 0 | 4 |
| LINC00622 | DAP | 0.611938 | 3 | 0 | 3 |
| LINC00622 | LEPROTL1 | 0.611605 | 3 | 0 | 3 |
| LINC00622 | LAMTOR4 | 0.611495 | 4 | 0 | 3 |
| LINC00622 | ANAPC5 | 0.610464 | 3 | 0 | 3 |
For details and further investigation, click here
