SDCCAG8

 

Full name: serologically defined colon cancer antigen 8 Alias Symbol: NY-CO-8|CCCAP|SLSN7|NPHP10|BBS16
Type: protein-coding gene Cytoband: 1q43-q44
Entrez ID: 10806 HGNC ID: HGNC:10671 Ensembl Gene: ENSG00000054282 OMIM ID: 613524
Drug and gene relationship at DGIdb

 

Expression of SDCCAG8:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SDCCAG8 10806 227785_at 1.5136 0.1168
GSE26886 SDCCAG8 10806 227785_at 1.8694 0.0000
GSE45670 SDCCAG8 10806 227785_at 1.0388 0.0187
GSE53622 SDCCAG8 10806 119294 -0.0524 0.5450
GSE53624 SDCCAG8 10806 54473 0.1037 0.0665
GSE63941 SDCCAG8 10806 227785_at 1.3862 0.1551
GSE77861 SDCCAG8 10806 227785_at 1.4595 0.0100
GSE97050 SDCCAG8 10806 A_23_P34546 -0.0317 0.9088
SRP007169 SDCCAG8 10806 RNAseq -0.3333 0.3221
SRP008496 SDCCAG8 10806 RNAseq 0.1652 0.5722
SRP064894 SDCCAG8 10806 RNAseq 0.5336 0.0002
SRP133303 SDCCAG8 10806 RNAseq 0.1657 0.2852
SRP159526 SDCCAG8 10806 RNAseq 0.6081 0.0914
SRP193095 SDCCAG8 10806 RNAseq 0.1628 0.1161
SRP219564 SDCCAG8 10806 RNAseq 0.5410 0.0145
TCGA SDCCAG8 10806 RNAseq 0.1234 0.0395

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by SDCCAG8 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SDCCAG8:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SDCCAG8 10806 7 1 22
GSE20123 SDCCAG8 10806 7 1 22
GSE43470 SDCCAG8 10806 6 2 35
GSE46452 SDCCAG8 10806 4 2 53
GSE47630 SDCCAG8 10806 15 0 25
GSE54993 SDCCAG8 10806 0 6 64
GSE54994 SDCCAG8 10806 18 0 35
GSE60625 SDCCAG8 10806 0 0 11
GSE74703 SDCCAG8 10806 6 1 29
GSE74704 SDCCAG8 10806 2 0 18
TCGA SDCCAG8 10806 44 7 45

Total number of gains: 109; Total number of losses: 20; Total Number of normals: 359.  


 

Somatic mutations of SDCCAG8:

 

Generating mutation plots.

 

Highly correlated genes for SDCCAG8:

 

Showing top 20/269 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SDCCAG8PIK3R40.83809303
SDCCAG8IGF1R0.791354303
SDCCAG8BID0.759354303
SDCCAG8ZNF2050.745426303
SDCCAG8ZNF7770.744745303
SDCCAG8PRPF190.73536404
SDCCAG8MDC10.727597504
SDCCAG8C7orf260.727188303
SDCCAG8EMC80.724554303
SDCCAG8SURF20.723871303
SDCCAG8JADE20.717988404
SDCCAG8TMX20.712775303
SDCCAG8TP630.705283404
SDCCAG8SDHAF10.705204303
SDCCAG8TOE10.702972303
SDCCAG8ARMC70.700278303
SDCCAG8THNSL20.697781303
SDCCAG8AAR20.693606303
SDCCAG8ZNF6390.688974504
SDCCAG8LAMTOR20.682146303

For details and further investigation, click here