| Full name: long intergenic non-protein coding RNA 662 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 19q11 | ||
| Entrez ID: 148189 | HGNC ID: HGNC:27122 | Ensembl Gene: ENSG00000261824 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00662:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00662 | 148189 | 235191_at | 0.0065 | 0.9914 | |
| GSE26886 | LINC00662 | 148189 | 1558256_at | -0.4778 | 0.0978 | |
| GSE45670 | LINC00662 | 148189 | 232281_at | 0.0305 | 0.8983 | |
| GSE53622 | LINC00662 | 148189 | 76204 | 0.6239 | 0.0000 | |
| GSE53624 | LINC00662 | 148189 | 76204 | 0.5243 | 0.0000 | |
| GSE63941 | LINC00662 | 148189 | 235191_at | -0.5788 | 0.6695 | |
| GSE77861 | LINC00662 | 148189 | 235191_at | -0.1372 | 0.3806 | |
| SRP007169 | LINC00662 | 148189 | RNAseq | 0.1030 | 0.8934 | |
| SRP064894 | LINC00662 | 148189 | RNAseq | -0.1402 | 0.5009 | |
| SRP133303 | LINC00662 | 148189 | RNAseq | -0.1075 | 0.6806 | |
| SRP159526 | LINC00662 | 148189 | RNAseq | 0.0970 | 0.7912 | |
| SRP193095 | LINC00662 | 148189 | RNAseq | -0.2570 | 0.0444 | |
| SRP219564 | LINC00662 | 148189 | RNAseq | -0.1303 | 0.8183 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00662 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00662:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00662 | 148189 | 8 | 7 | 15 | |
| GSE20123 | LINC00662 | 148189 | 8 | 6 | 16 | |
| GSE43470 | LINC00662 | 148189 | 6 | 6 | 31 | |
| GSE46452 | LINC00662 | 148189 | 47 | 1 | 11 | |
| GSE47630 | LINC00662 | 148189 | 8 | 6 | 26 | |
| GSE54993 | LINC00662 | 148189 | 17 | 3 | 50 | |
| GSE54994 | LINC00662 | 148189 | 7 | 11 | 35 | |
| GSE60625 | LINC00662 | 148189 | 9 | 0 | 2 | |
| GSE74703 | LINC00662 | 148189 | 6 | 4 | 26 | |
| GSE74704 | LINC00662 | 148189 | 6 | 4 | 10 | |
| TCGA | LINC00662 | 148189 | 20 | 16 | 60 |
Total number of gains: 142; Total number of losses: 64; Total Number of normals: 282.
Somatic mutations of LINC00662:
Generating mutation plots.
Highly correlated genes for LINC00662:
Showing top 20/26 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00662 | HCG18 | 0.794665 | 3 | 0 | 3 |
| LINC00662 | ZNF763 | 0.794021 | 3 | 0 | 3 |
| LINC00662 | BFSP2-AS1 | 0.771013 | 3 | 0 | 3 |
| LINC00662 | LINC00276 | 0.766239 | 3 | 0 | 3 |
| LINC00662 | SLC22A31 | 0.723404 | 3 | 0 | 3 |
| LINC00662 | ZSCAN30 | 0.704466 | 3 | 0 | 3 |
| LINC00662 | LINC01352 | 0.678478 | 3 | 0 | 3 |
| LINC00662 | BDNF-AS | 0.674491 | 3 | 0 | 3 |
| LINC00662 | C19orf44 | 0.666945 | 3 | 0 | 3 |
| LINC00662 | SPACA3 | 0.643855 | 3 | 0 | 3 |
| LINC00662 | LINC01007 | 0.635587 | 3 | 0 | 3 |
| LINC00662 | EBLN2 | 0.633739 | 3 | 0 | 3 |
| LINC00662 | TTC21A | 0.623068 | 3 | 0 | 3 |
| LINC00662 | RLIM | 0.614507 | 3 | 0 | 3 |
| LINC00662 | PRSS50 | 0.597507 | 3 | 0 | 3 |
| LINC00662 | SLC4A8 | 0.594065 | 4 | 0 | 4 |
| LINC00662 | LTA | 0.592677 | 4 | 0 | 3 |
| LINC00662 | MEGF11 | 0.58826 | 4 | 0 | 3 |
| LINC00662 | DCSTAMP | 0.574745 | 3 | 0 | 3 |
| LINC00662 | CFLAR | 0.569215 | 4 | 0 | 3 |
For details and further investigation, click here
