LINC00276

 

Full name: long intergenic non-protein coding RNA 276 Alias Symbol: 
Type: non-coding RNA Cytoband: 2p24.3
Entrez ID: 100499171 HGNC ID: HGNC:38663 Ensembl Gene: ENSG00000230448 OMIM ID: 

 

Expression of LINC00276:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC00276 100499171 1569755_at -0.0228 0.9437
GSE26886 LINC00276 100499171 1569755_at -0.0133 0.8894
GSE45670 LINC00276 100499171 1569755_at 0.0540 0.4987
GSE53622 LINC00276 100499171 6732 0.5754 0.0002
GSE53624 LINC00276 100499171 6732 0.4292 0.0005
GSE63941 LINC00276 100499171 1569755_at 0.0545 0.7155
GSE77861 LINC00276 100499171 1569755_at -0.0216 0.8377
SRP064894 LINC00276 100499171 RNAseq -0.3880 0.1273
SRP133303 LINC00276 100499171 RNAseq 0.2239 0.0546
SRP159526 LINC00276 100499171 RNAseq 0.7775 0.1179
SRP193095 LINC00276 100499171 RNAseq 0.2567 0.0741
SRP219564 LINC00276 100499171 RNAseq -0.2173 0.6748

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LINC00276 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of LINC00276:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC00276 100499171 8 2 20
GSE20123 LINC00276 100499171 8 2 20
GSE43470 LINC00276 100499171 2 0 41
GSE46452 LINC00276 100499171 3 4 52
GSE47630 LINC00276 100499171 7 0 33
GSE54993 LINC00276 100499171 0 7 63
GSE54994 LINC00276 100499171 10 0 43
GSE60625 LINC00276 100499171 0 3 8
GSE74703 LINC00276 100499171 2 0 34
GSE74704 LINC00276 100499171 7 2 11
TCGA LINC00276 100499171 34 6 56

Total number of gains: 81; Total number of losses: 26; Total Number of normals: 381.  

 

Somatic mutations of LINC00276:

 

Generating mutation plots.

 

Highly correlated genes for LINC00276:

 

Showing top 20/47 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC00276SLC25A530.826049303
LINC00276HCG180.807748303
LINC00276RAX20.769497303
LINC00276LINC006620.766239303
LINC00276OXTR0.74125303
LINC00276RBM430.713738303
LINC00276DCAF4L20.711568303
LINC00276TMEM63B0.708956303
LINC00276CDH240.704152303
LINC00276DENND30.690856303
LINC00276SERPINA100.684511303
LINC00276RBM200.674987303
LINC00276IGF2-AS0.672894303
LINC00276LRSAM10.668914303
LINC00276CHST100.667339303
LINC00276KLRG20.662368303
LINC00276JRK0.657947403
LINC00276SLC52A10.655669403
LINC00276ZNF2480.651843403
LINC00276ZBTB46-AS10.650458303

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