| Full name: long intergenic non-protein coding RNA 845 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 10q21.2 | ||
| Entrez ID: 100507058 | HGNC ID: HGNC:45033 | Ensembl Gene: ENSG00000227244 | OMIM ID: |
Expression of LINC00845:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00845 | 100507058 | 238298_at | -0.0436 | 0.8916 | |
| GSE26886 | LINC00845 | 100507058 | 238298_at | -0.1172 | 0.2744 | |
| GSE45670 | LINC00845 | 100507058 | 238298_at | 0.1039 | 0.2474 | |
| GSE63941 | LINC00845 | 100507058 | 238298_at | 0.0959 | 0.5276 | |
| GSE77861 | LINC00845 | 100507058 | 238298_at | -0.1851 | 0.1408 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of LINC00845:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00845 | 100507058 | 2 | 7 | 21 | |
| GSE20123 | LINC00845 | 100507058 | 2 | 7 | 21 | |
| GSE43470 | LINC00845 | 100507058 | 2 | 5 | 36 | |
| GSE46452 | LINC00845 | 100507058 | 0 | 11 | 48 | |
| GSE47630 | LINC00845 | 100507058 | 4 | 12 | 24 | |
| GSE54993 | LINC00845 | 100507058 | 9 | 0 | 61 | |
| GSE54994 | LINC00845 | 100507058 | 2 | 10 | 41 | |
| GSE60625 | LINC00845 | 100507058 | 0 | 0 | 11 | |
| GSE74703 | LINC00845 | 100507058 | 2 | 3 | 31 | |
| GSE74704 | LINC00845 | 100507058 | 1 | 5 | 14 | |
| TCGA | LINC00845 | 100507058 | 11 | 23 | 62 |
Total number of gains: 35; Total number of losses: 83; Total Number of normals: 370.
Somatic mutations of LINC00845:
Generating mutation plots.
Highly correlated genes for LINC00845:
Showing top 20/41 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00845 | APOA5 | 0.710982 | 3 | 0 | 3 |
| LINC00845 | LINC00868 | 0.708823 | 3 | 0 | 3 |
| LINC00845 | MAPT-AS1 | 0.682947 | 3 | 0 | 3 |
| LINC00845 | HTR4 | 0.658212 | 4 | 0 | 3 |
| LINC00845 | LINC00692 | 0.653684 | 3 | 0 | 3 |
| LINC00845 | SMYD1 | 0.65095 | 3 | 0 | 3 |
| LINC00845 | TTTY11 | 0.621669 | 4 | 0 | 4 |
| LINC00845 | HOXB-AS3 | 0.617765 | 3 | 0 | 3 |
| LINC00845 | HCN4 | 0.613476 | 3 | 0 | 3 |
| LINC00845 | LCN12 | 0.612188 | 3 | 0 | 3 |
| LINC00845 | LINC00315 | 0.612041 | 3 | 0 | 3 |
| LINC00845 | KIF12 | 0.604123 | 4 | 0 | 3 |
| LINC00845 | FSD2 | 0.599146 | 3 | 0 | 3 |
| LINC00845 | C2orf72 | 0.59786 | 3 | 0 | 3 |
| LINC00845 | TULP2 | 0.59771 | 3 | 0 | 3 |
| LINC00845 | OR1D2 | 0.592631 | 4 | 0 | 3 |
| LINC00845 | KIR2DS1 | 0.586257 | 4 | 0 | 3 |
| LINC00845 | ACTL6B | 0.58563 | 3 | 0 | 3 |
| LINC00845 | ASCL3 | 0.582355 | 4 | 0 | 3 |
| LINC00845 | SLC5A11 | 0.578918 | 4 | 0 | 3 |
For details and further investigation, click here
