| Full name: long intergenic non-protein coding RNA 852 | Alias Symbol: NAG73|GHRL-AS2 | ||
| Type: non-coding RNA | Cytoband: 3p25.3 | ||
| Entrez ID: 84657 | HGNC ID: HGNC:29904 | Ensembl Gene: ENSG00000231177 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00852:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00852 | 84657 | 223725_at | 0.0940 | 0.8436 | |
| GSE26886 | LINC00852 | 84657 | 223725_at | -0.2227 | 0.0227 | |
| GSE45670 | LINC00852 | 84657 | 223725_at | -0.1513 | 0.1407 | |
| GSE53622 | LINC00852 | 84657 | 169129 | -0.3104 | 0.0001 | |
| GSE53624 | LINC00852 | 84657 | 169129 | -0.3404 | 0.0000 | |
| GSE63941 | LINC00852 | 84657 | 223725_at | -0.0110 | 0.9673 | |
| GSE77861 | LINC00852 | 84657 | 223725_at | -0.2514 | 0.0451 | |
| SRP133303 | LINC00852 | 84657 | RNAseq | -0.6344 | 0.0022 | |
| SRP159526 | LINC00852 | 84657 | RNAseq | -1.5862 | 0.0030 | |
| SRP219564 | LINC00852 | 84657 | RNAseq | -0.6960 | 0.2580 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by LINC00852 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00852:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00852 | 84657 | 1 | 18 | 11 | |
| GSE20123 | LINC00852 | 84657 | 1 | 18 | 11 | |
| GSE43470 | LINC00852 | 84657 | 1 | 20 | 22 | |
| GSE46452 | LINC00852 | 84657 | 2 | 17 | 40 | |
| GSE47630 | LINC00852 | 84657 | 2 | 23 | 15 | |
| GSE54993 | LINC00852 | 84657 | 6 | 1 | 63 | |
| GSE54994 | LINC00852 | 84657 | 3 | 31 | 19 | |
| GSE60625 | LINC00852 | 84657 | 5 | 0 | 6 | |
| GSE74703 | LINC00852 | 84657 | 1 | 16 | 19 | |
| GSE74704 | LINC00852 | 84657 | 1 | 10 | 9 | |
| TCGA | LINC00852 | 84657 | 4 | 66 | 26 |
Total number of gains: 27; Total number of losses: 220; Total Number of normals: 241.
Somatic mutations of LINC00852:
Generating mutation plots.
Highly correlated genes for LINC00852:
Showing top 20/237 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00852 | MYLK4 | 0.729343 | 3 | 0 | 3 |
| LINC00852 | FNDC4 | 0.693154 | 3 | 0 | 3 |
| LINC00852 | ANO10 | 0.684358 | 3 | 0 | 3 |
| LINC00852 | OPHN1 | 0.683353 | 3 | 0 | 3 |
| LINC00852 | CES2 | 0.67216 | 3 | 0 | 3 |
| LINC00852 | MAPK13 | 0.659623 | 4 | 0 | 4 |
| LINC00852 | DNAJC28 | 0.654934 | 3 | 0 | 3 |
| LINC00852 | LINC00557 | 0.652805 | 3 | 0 | 3 |
| LINC00852 | VASN | 0.651642 | 3 | 0 | 3 |
| LINC00852 | CPTP | 0.649777 | 3 | 0 | 3 |
| LINC00852 | SNORA68 | 0.648836 | 3 | 0 | 3 |
| LINC00852 | ACAA1 | 0.647797 | 3 | 0 | 3 |
| LINC00852 | PADI1 | 0.643937 | 3 | 0 | 3 |
| LINC00852 | GBP6 | 0.641451 | 3 | 0 | 3 |
| LINC00852 | CCNYL1 | 0.632208 | 3 | 0 | 3 |
| LINC00852 | DOK4 | 0.627162 | 3 | 0 | 3 |
| LINC00852 | TMEM79 | 0.625142 | 3 | 0 | 3 |
| LINC00852 | C2CD2L | 0.624511 | 3 | 0 | 3 |
| LINC00852 | TNNI2 | 0.624099 | 3 | 0 | 3 |
| LINC00852 | ACOT4 | 0.619933 | 4 | 0 | 3 |
For details and further investigation, click here
